Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB38P57729 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAB38P57729 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAB38P57729 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB38P57729 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB38P57729 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RAB38P57729 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RAB38P57729 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB38P57729 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RAB38P57729 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB38P57729 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 AC006449.6-201ENST00000612330 2296 ntBASIC15.4■□□□□ 0.06
RAB38P57729 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB38P57729 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RAB38P57729 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB38P57729 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB38P57729 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB38P57729 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB38P57729 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
RAB38P57729 AC024267.1-201ENST00000582320 895 ntBASIC15.4■□□□□ 0.06
RAB38P57729 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB38P57729 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
RAB38P57729 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB38P57729 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 MTHFR-217ENST00000641820 1569 ntBASIC15.4■□□□□ 0.06
RAB38P57729 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB38P57729 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB38P57729 AC099398.1-201ENST00000567919 2776 ntBASIC15.4■□□□□ 0.06
RAB38P57729 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB38P57729 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB38P57729 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB38P57729 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB38P57729 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB38P57729 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAB38P57729 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB38P57729 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB38P57729 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAB38P57729 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB38P57729 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB38P57729 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.39■□□□□ 0.05
RAB38P57729 RBPMS2P1-201ENST00000437762 623 ntBASIC15.39■□□□□ 0.05
RAB38P57729 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB38P57729 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB38P57729 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB38P57729 RNA5SP410-201ENST00000516285 106 ntBASIC15.39■□□□□ 0.05
RAB38P57729 ALG1L8P-201ENST00000533887 760 ntBASIC15.39■□□□□ 0.05
RAB38P57729 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB38P57729 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB38P57729 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB38P57729 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 AP3S2-216ENST00000617003 1561 ntBASIC15.39■□□□□ 0.05
RAB38P57729 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
RAB38P57729 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB38P57729 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB38P57729 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB38P57729 AC006449.5-201ENST00000610658 2098 ntBASIC15.39■□□□□ 0.05
RAB38P57729 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB38P57729 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
RAB38P57729 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB38P57729 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.38■□□□□ 0.05
RAB38P57729 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB38P57729 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RAB38P57729 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB38P57729 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB38P57729 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB38P57729 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB38P57729 AC092364.2-201ENST00000596710 2692 ntBASIC15.38■□□□□ 0.05
RAB38P57729 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB38P57729 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB38P57729 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms