Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HADHBP55084 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.14■□□□□ 0.33
HADHBP55084 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.14■□□□□ 0.33
HADHBP55084 RNA5SP415-201ENST00000517246 115 ntBASIC17.14■□□□□ 0.33
HADHBP55084 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.14■□□□□ 0.33
HADHBP55084 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.14■□□□□ 0.33
HADHBP55084 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.14■□□□□ 0.33
HADHBP55084 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.14■□□□□ 0.33
HADHBP55084 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HADHBP55084 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.14■□□□□ 0.33
HADHBP55084 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HADHBP55084 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.14■□□□□ 0.33
HADHBP55084 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HADHBP55084 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.14■□□□□ 0.33
HADHBP55084 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.14■□□□□ 0.33
HADHBP55084 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.14■□□□□ 0.33
HADHBP55084 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HADHBP55084 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HADHBP55084 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.14■□□□□ 0.33
HADHBP55084 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.13■□□□□ 0.33
HADHBP55084 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HADHBP55084 AC013268.4-201ENST00000637413 2228 ntBASIC17.13■□□□□ 0.33
HADHBP55084 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.13■□□□□ 0.33
HADHBP55084 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.13■□□□□ 0.33
HADHBP55084 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 AC079776.4-201ENST00000511039 504 ntBASIC17.13■□□□□ 0.33
HADHBP55084 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 AC023141.13-201ENST00000604991 943 ntBASIC17.13■□□□□ 0.33
HADHBP55084 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.13■□□□□ 0.33
HADHBP55084 AC007064.4-201ENST00000637740 555 ntBASIC17.13■□□□□ 0.33
HADHBP55084 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.13■□□□□ 0.33
HADHBP55084 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HADHBP55084 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
HADHBP55084 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.13■□□□□ 0.33
HADHBP55084 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HADHBP55084 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHBP55084 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.12■□□□□ 0.33
HADHBP55084 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.12■□□□□ 0.33
HADHBP55084 AP001282.1-201ENST00000531301 1499 ntBASIC17.12■□□□□ 0.33
HADHBP55084 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHBP55084 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HADHBP55084 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.12■□□□□ 0.33
HADHBP55084 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HADHBP55084 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.12■□□□□ 0.33
HADHBP55084 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HADHBP55084 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHBP55084 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHBP55084 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHBP55084 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.12■□□□□ 0.33
HADHBP55084 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HADHBP55084 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.12■□□□□ 0.33
HADHBP55084 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.12■□□□□ 0.33
HADHBP55084 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.12■□□□□ 0.33
HADHBP55084 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HADHBP55084 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
HADHBP55084 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.12■□□□□ 0.33
HADHBP55084 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.12■□□□□ 0.33
HADHBP55084 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.12■□□□□ 0.33
HADHBP55084 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
HADHBP55084 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HADHBP55084 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HADHBP55084 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms