Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 HCG4-201ENST00000418983 998 ntBASIC16.58■□□□□ 0.24
LIMK2P53671 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
LIMK2P53671 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.58■□□□□ 0.24
LIMK2P53671 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.58■□□□□ 0.24
LIMK2P53671 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.58■□□□□ 0.24
LIMK2P53671 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.58■□□□□ 0.24
LIMK2P53671 KRT19P2-202ENST00000557173 1012 ntBASIC16.58■□□□□ 0.24
LIMK2P53671 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.58■□□□□ 0.24
LIMK2P53671 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.58■□□□□ 0.24
LIMK2P53671 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.58■□□□□ 0.24
LIMK2P53671 AL596442.2-201ENST00000610240 980 ntBASIC16.58■□□□□ 0.24
LIMK2P53671 AP001350.2-201ENST00000625104 1094 ntBASIC16.58■□□□□ 0.24
LIMK2P53671 BCAR1-209ENST00000546196 1340 ntBASIC16.58■□□□□ 0.24
LIMK2P53671 AC129492.6-201ENST00000611383 1305 ntBASIC16.58■□□□□ 0.24
LIMK2P53671 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LIMK2P53671 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.58■□□□□ 0.24
LIMK2P53671 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.58■□□□□ 0.24
LIMK2P53671 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.58■□□□□ 0.24
LIMK2P53671 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LIMK2P53671 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.58■□□□□ 0.24
LIMK2P53671 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LIMK2P53671 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIMK2P53671 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
LIMK2P53671 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.57■□□□□ 0.24
LIMK2P53671 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LIMK2P53671 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LIMK2P53671 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.57■□□□□ 0.24
LIMK2P53671 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.57■□□□□ 0.24
LIMK2P53671 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.57■□□□□ 0.24
LIMK2P53671 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.57■□□□□ 0.24
LIMK2P53671 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 SNHG9-202ENST00000564014 471 ntBASIC16.57■□□□□ 0.24
LIMK2P53671 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.57■□□□□ 0.24
LIMK2P53671 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.57■□□□□ 0.24
LIMK2P53671 AL078644.1-201ENST00000609881 752 ntBASIC16.57■□□□□ 0.24
LIMK2P53671 AC007064.4-201ENST00000637740 555 ntBASIC16.57■□□□□ 0.24
LIMK2P53671 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.57■□□□□ 0.24
LIMK2P53671 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LIMK2P53671 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.57■□□□□ 0.24
LIMK2P53671 ELL2P1-201ENST00000413990 1906 ntBASIC16.57■□□□□ 0.24
LIMK2P53671 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.57■□□□□ 0.24
LIMK2P53671 REXO1L8P-201ENST00000604378 1897 ntBASIC16.56■□□□□ 0.24
LIMK2P53671 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LIMK2P53671 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LIMK2P53671 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.56■□□□□ 0.24
LIMK2P53671 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.56■□□□□ 0.24
LIMK2P53671 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.56■□□□□ 0.24
LIMK2P53671 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LIMK2P53671 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.56■□□□□ 0.24
LIMK2P53671 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.56■□□□□ 0.24
LIMK2P53671 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LIMK2P53671 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.56■□□□□ 0.24
LIMK2P53671 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.56■□□□□ 0.24
LIMK2P53671 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.56■□□□□ 0.24
LIMK2P53671 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.56■□□□□ 0.24
LIMK2P53671 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
LIMK2P53671 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LIMK2P53671 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
LIMK2P53671 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.56■□□□□ 0.24
LIMK2P53671 AC023141.13-201ENST00000604991 943 ntBASIC16.56■□□□□ 0.24
LIMK2P53671 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LIMK2P53671 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.56■□□□□ 0.24
LIMK2P53671 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LIMK2P53671 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms