Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.08■□□□□ 0.49
GPC3P51654 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GPC3P51654 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GPC3P51654 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
GPC3P51654 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
GPC3P51654 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GPC3P51654 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.08■□□□□ 0.48
GPC3P51654 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.08■□□□□ 0.48
GPC3P51654 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.08■□□□□ 0.48
GPC3P51654 UGT1A2P-201ENST00000454886 866 ntBASIC18.08■□□□□ 0.48
GPC3P51654 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GPC3P51654 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.08■□□□□ 0.48
GPC3P51654 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.08■□□□□ 0.48
GPC3P51654 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.08■□□□□ 0.48
GPC3P51654 AC073592.8-201ENST00000624126 511 ntBASIC18.08■□□□□ 0.48
GPC3P51654 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC3P51654 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.08■□□□□ 0.48
GPC3P51654 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC3P51654 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC3P51654 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.08■□□□□ 0.48
GPC3P51654 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.08■□□□□ 0.48
GPC3P51654 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC3P51654 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
GPC3P51654 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.08■□□□□ 0.48
GPC3P51654 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC3P51654 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC3P51654 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC3P51654 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC3P51654 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC3P51654 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC3P51654 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC3P51654 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC3P51654 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
GPC3P51654 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC3P51654 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.07■□□□□ 0.48
GPC3P51654 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.07■□□□□ 0.48
GPC3P51654 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC3P51654 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.07■□□□□ 0.48
GPC3P51654 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.07■□□□□ 0.48
GPC3P51654 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC3P51654 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.07■□□□□ 0.48
GPC3P51654 SPDYE12P-201ENST00000618416 771 ntBASIC18.07■□□□□ 0.48
GPC3P51654 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.07■□□□□ 0.48
GPC3P51654 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC3P51654 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC3P51654 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
GPC3P51654 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC3P51654 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.06■□□□□ 0.48
GPC3P51654 AC124067.4-201ENST00000519691 2379 ntBASIC18.06■□□□□ 0.48
GPC3P51654 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC3P51654 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.06■□□□□ 0.48
GPC3P51654 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.06■□□□□ 0.48
GPC3P51654 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GPC3P51654 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.06■□□□□ 0.48
GPC3P51654 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
GPC3P51654 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
GPC3P51654 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.06■□□□□ 0.48
GPC3P51654 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC3P51654 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC3P51654 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GPC3P51654 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC3P51654 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.06■□□□□ 0.48
GPC3P51654 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.06■□□□□ 0.48
GPC3P51654 AL353705.2-201ENST00000428243 662 ntBASIC18.06■□□□□ 0.48
GPC3P51654 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC3P51654 RNA5SP410-201ENST00000516285 106 ntBASIC18.06■□□□□ 0.48
GPC3P51654 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC3P51654 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.06■□□□□ 0.48
GPC3P51654 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GPC3P51654 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC3P51654 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.06■□□□□ 0.48
GPC3P51654 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.06■□□□□ 0.48
GPC3P51654 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.06■□□□□ 0.48
GPC3P51654 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.06■□□□□ 0.48
GPC3P51654 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC3P51654 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.05■□□□□ 0.48
GPC3P51654 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GPC3P51654 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
GPC3P51654 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.05■□□□□ 0.48
GPC3P51654 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC3P51654 MIR661-201ENST00000384842 89 ntBASIC18.05■□□□□ 0.48
GPC3P51654 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.05■□□□□ 0.48
GPC3P51654 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC3P51654 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.05■□□□□ 0.48
GPC3P51654 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC3P51654 AC027369.6-201ENST00000525520 931 ntBASIC18.05■□□□□ 0.48
GPC3P51654 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.05■□□□□ 0.48
GPC3P51654 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC3P51654 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
GPC3P51654 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
GPC3P51654 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.05■□□□□ 0.48
GPC3P51654 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms