Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB28P51157 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RAB28P51157 AL592424.1-201ENST00000563624 1536 ntBASIC15.83■□□□□ 0.12
RAB28P51157 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RAB28P51157 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB28P51157 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RAB28P51157 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAB28P51157 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.82■□□□□ 0.12
RAB28P51157 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB28P51157 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB28P51157 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RAB28P51157 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RAB28P51157 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAB28P51157 AL139400.1-201ENST00000366220 510 ntBASIC15.82■□□□□ 0.12
RAB28P51157 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB28P51157 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.82■□□□□ 0.12
RAB28P51157 METTL21AP1-201ENST00000438852 635 ntBASIC15.82■□□□□ 0.12
RAB28P51157 SPDYE14P-201ENST00000442619 822 ntBASIC15.82■□□□□ 0.12
RAB28P51157 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAB28P51157 AC026150.2-201ENST00000564693 1156 ntBASIC15.82■□□□□ 0.12
RAB28P51157 AC024267.1-201ENST00000582320 895 ntBASIC15.82■□□□□ 0.12
RAB28P51157 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 AL365330.1-201ENST00000607459 531 ntBASIC15.82■□□□□ 0.12
RAB28P51157 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB28P51157 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
RAB28P51157 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB28P51157 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 AP3S2-216ENST00000617003 1561 ntBASIC15.82■□□□□ 0.12
RAB28P51157 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
RAB28P51157 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 REXO1L8P-201ENST00000604378 1897 ntBASIC15.82■□□□□ 0.12
RAB28P51157 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB28P51157 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.82■□□□□ 0.12
RAB28P51157 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 AC079328.2-201ENST00000561241 3354 ntBASIC15.81■□□□□ 0.12
RAB28P51157 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB28P51157 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RAB28P51157 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB28P51157 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB28P51157 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB28P51157 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB28P51157 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RAB28P51157 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.81■□□□□ 0.12
RAB28P51157 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB28P51157 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.81■□□□□ 0.12
RAB28P51157 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB28P51157 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 RNA5SP410-201ENST00000516285 106 ntBASIC15.81■□□□□ 0.12
RAB28P51157 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB28P51157 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 AL512356.2-201ENST00000546955 174 ntBASIC15.81■□□□□ 0.12
RAB28P51157 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RAB28P51157 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.81■□□□□ 0.12
RAB28P51157 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB28P51157 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB28P51157 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB28P51157 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RAB28P51157 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RAB28P51157 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RAB28P51157 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB28P51157 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
RAB28P51157 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB28P51157 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB28P51157 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB28P51157 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RAB28P51157 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms