Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.49■□□□□ 0.55
VEGFBP49765 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.49■□□□□ 0.55
VEGFBP49765 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.49■□□□□ 0.55
VEGFBP49765 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VEGFBP49765 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VEGFBP49765 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VEGFBP49765 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VEGFBP49765 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
VEGFBP49765 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.49■□□□□ 0.55
VEGFBP49765 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VEGFBP49765 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.49■□□□□ 0.55
VEGFBP49765 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.49■□□□□ 0.55
VEGFBP49765 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.49■□□□□ 0.55
VEGFBP49765 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
VEGFBP49765 TUBB8P12-201ENST00000308911 1335 ntBASIC18.49■□□□□ 0.55
VEGFBP49765 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VEGFBP49765 TUBB7P-202ENST00000428444 1305 ntBASIC18.49■□□□□ 0.55
VEGFBP49765 TUBB8P7-204ENST00000567960 1332 ntBASIC18.49■□□□□ 0.55
VEGFBP49765 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VEGFBP49765 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
VEGFBP49765 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.48■□□□□ 0.55
VEGFBP49765 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 KRT18P64-201ENST00000434946 1219 ntBASIC18.48■□□□□ 0.55
VEGFBP49765 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.48■□□□□ 0.55
VEGFBP49765 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.48■□□□□ 0.55
VEGFBP49765 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.48■□□□□ 0.55
VEGFBP49765 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.48■□□□□ 0.55
VEGFBP49765 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 AC007663.3-201ENST00000609632 465 ntBASIC18.48■□□□□ 0.55
VEGFBP49765 AC145423.3-201ENST00000615987 467 ntBASIC18.48■□□□□ 0.55
VEGFBP49765 AC148477.9-201ENST00000623974 539 ntBASIC18.48■□□□□ 0.55
VEGFBP49765 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
VEGFBP49765 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.48■□□□□ 0.55
VEGFBP49765 AC006453.4-201ENST00000636949 1252 ntBASIC18.48■□□□□ 0.55
VEGFBP49765 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.48■□□□□ 0.55
VEGFBP49765 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.48■□□□□ 0.55
VEGFBP49765 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 AC016396.2-201ENST00000562575 1417 ntBASIC18.48■□□□□ 0.55
VEGFBP49765 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VEGFBP49765 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VEGFBP49765 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.47■□□□□ 0.55
VEGFBP49765 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VEGFBP49765 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.47■□□□□ 0.55
VEGFBP49765 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.47■□□□□ 0.55
VEGFBP49765 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
VEGFBP49765 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
VEGFBP49765 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VEGFBP49765 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
VEGFBP49765 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.47■□□□□ 0.55
VEGFBP49765 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.47■□□□□ 0.55
VEGFBP49765 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VEGFBP49765 AC008132.1-202ENST00000342005 1389 ntBASIC18.47■□□□□ 0.55
VEGFBP49765 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.47■□□□□ 0.55
VEGFBP49765 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.47■□□□□ 0.55
VEGFBP49765 AC007274.2-201ENST00000421675 662 ntBASIC18.47■□□□□ 0.55
VEGFBP49765 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.47■□□□□ 0.55
VEGFBP49765 RNA5SP486-201ENST00000515961 83 ntBASIC18.47■□□□□ 0.55
VEGFBP49765 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VEGFBP49765 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
VEGFBP49765 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VEGFBP49765 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.47■□□□□ 0.55
VEGFBP49765 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VEGFBP49765 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VEGFBP49765 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VEGFBP49765 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
VEGFBP49765 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VEGFBP49765 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.47■□□□□ 0.55
VEGFBP49765 AL138709.1-201ENST00000614840 1693 ntBASIC18.47■□□□□ 0.55
VEGFBP49765 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.47■□□□□ 0.55
VEGFBP49765 AC012317.2-201ENST00000623305 2251 ntBASIC18.47■□□□□ 0.55
VEGFBP49765 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VEGFBP49765 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VEGFBP49765 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VEGFBP49765 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VEGFBP49765 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VEGFBP49765 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.46■□□□□ 0.55
VEGFBP49765 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.46■□□□□ 0.55
VEGFBP49765 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
VEGFBP49765 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VEGFBP49765 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VEGFBP49765 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.46■□□□□ 0.55
VEGFBP49765 MIR1227-201ENST00000408484 88 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms