Protein–RNA interactions for Protein: P47895

ALDH1A3, Aldehyde dehydrogenase family 1 member A3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3P47895 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ALDH1A3P47895 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A3P47895 AL645728.1-201ENST00000366221 2101 ntBASIC17.35■□□□□ 0.37
ALDH1A3P47895 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
ALDH1A3P47895 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A3P47895 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A3P47895 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.35■□□□□ 0.37
ALDH1A3P47895 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
ALDH1A3P47895 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A3P47895 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.34■□□□□ 0.37
ALDH1A3P47895 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.34■□□□□ 0.37
ALDH1A3P47895 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.34■□□□□ 0.37
ALDH1A3P47895 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.34■□□□□ 0.37
ALDH1A3P47895 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.34■□□□□ 0.37
ALDH1A3P47895 AC060834.1-201ENST00000443027 2032 ntBASIC17.34■□□□□ 0.37
ALDH1A3P47895 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ALDH1A3P47895 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 AL035456.1-201ENST00000456064 1369 ntBASIC17.34■□□□□ 0.37
ALDH1A3P47895 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 RNA5SP410-201ENST00000516285 106 ntBASIC17.34■□□□□ 0.37
ALDH1A3P47895 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.34■□□□□ 0.37
ALDH1A3P47895 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.34■□□□□ 0.37
ALDH1A3P47895 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.34■□□□□ 0.37
ALDH1A3P47895 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.34■□□□□ 0.37
ALDH1A3P47895 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.34■□□□□ 0.37
ALDH1A3P47895 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A3P47895 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
ALDH1A3P47895 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ALDH1A3P47895 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ALDH1A3P47895 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ALDH1A3P47895 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.33■□□□□ 0.37
ALDH1A3P47895 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ALDH1A3P47895 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
ALDH1A3P47895 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ALDH1A3P47895 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ALDH1A3P47895 CICP6-201ENST00000457191 2729 ntBASIC17.33■□□□□ 0.36
ALDH1A3P47895 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ALDH1A3P47895 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ALDH1A3P47895 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 TERF1P3-201ENST00000505638 1227 ntBASIC17.33■□□□□ 0.36
ALDH1A3P47895 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.33■□□□□ 0.36
ALDH1A3P47895 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ALDH1A3P47895 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ALDH1A3P47895 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.33■□□□□ 0.36
ALDH1A3P47895 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ALDH1A3P47895 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ALDH1A3P47895 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.33■□□□□ 0.36
ALDH1A3P47895 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ALDH1A3P47895 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A3P47895 AL512652.2-201ENST00000625156 1716 ntBASIC17.33■□□□□ 0.36
ALDH1A3P47895 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A3P47895 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A3P47895 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A3P47895 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A3P47895 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A3P47895 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A3P47895 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A3P47895 AC236430.1-201ENST00000402231 743 ntBASIC17.32■□□□□ 0.36
ALDH1A3P47895 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 AC002472.2-201ENST00000442739 958 ntBASIC17.32■□□□□ 0.36
ALDH1A3P47895 UGT1A2P-201ENST00000454886 866 ntBASIC17.32■□□□□ 0.36
ALDH1A3P47895 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A3P47895 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.32■□□□□ 0.36
ALDH1A3P47895 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A3P47895 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms