Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NEDD4P46934 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEDD4P46934 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NEDD4P46934 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEDD4P46934 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEDD4P46934 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEDD4P46934 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
NEDD4P46934 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.27■□□□□ 0.68
NEDD4P46934 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.27■□□□□ 0.68
NEDD4P46934 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.27■□□□□ 0.68
NEDD4P46934 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NEDD4P46934 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.27■□□□□ 0.68
NEDD4P46934 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
NEDD4P46934 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
NEDD4P46934 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
NEDD4P46934 AL391005.1-201ENST00000623953 2435 ntBASIC19.27■□□□□ 0.67
NEDD4P46934 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
NEDD4P46934 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NEDD4P46934 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.26■□□□□ 0.67
NEDD4P46934 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.26■□□□□ 0.67
NEDD4P46934 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.26■□□□□ 0.67
NEDD4P46934 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.26■□□□□ 0.67
NEDD4P46934 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.26■□□□□ 0.67
NEDD4P46934 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.26■□□□□ 0.67
NEDD4P46934 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.26■□□□□ 0.67
NEDD4P46934 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.26■□□□□ 0.67
NEDD4P46934 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NEDD4P46934 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.26■□□□□ 0.67
NEDD4P46934 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NEDD4P46934 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.26■□□□□ 0.67
NEDD4P46934 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NEDD4P46934 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.26■□□□□ 0.67
NEDD4P46934 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 AC008677.1-201ENST00000519230 1561 ntBASIC19.26■□□□□ 0.67
NEDD4P46934 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NEDD4P46934 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NEDD4P46934 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.25■□□□□ 0.67
NEDD4P46934 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.25■□□□□ 0.67
NEDD4P46934 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.25■□□□□ 0.67
NEDD4P46934 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.25■□□□□ 0.67
NEDD4P46934 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.25■□□□□ 0.67
NEDD4P46934 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.25■□□□□ 0.67
NEDD4P46934 MIR6080-201ENST00000617359 66 ntBASIC19.25■□□□□ 0.67
NEDD4P46934 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.25■□□□□ 0.67
NEDD4P46934 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.25■□□□□ 0.67
NEDD4P46934 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 MTHFR-217ENST00000641820 1569 ntBASIC19.25■□□□□ 0.67
NEDD4P46934 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.25■□□□□ 0.67
NEDD4P46934 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
NEDD4P46934 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.25■□□□□ 0.67
NEDD4P46934 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 PMS2P2-201ENST00000425039 1128 ntBASIC19.25■□□□□ 0.67
NEDD4P46934 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.25■□□□□ 0.67
NEDD4P46934 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.25■□□□□ 0.67
NEDD4P46934 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
NEDD4P46934 AL512356.2-201ENST00000546955 174 ntBASIC19.25■□□□□ 0.67
NEDD4P46934 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
NEDD4P46934 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.25■□□□□ 0.67
NEDD4P46934 BANF1P1-201ENST00000553684 263 ntBASIC19.25■□□□□ 0.67
NEDD4P46934 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.25■□□□□ 0.67
NEDD4P46934 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
NEDD4P46934 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEDD4P46934 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.24■□□□□ 0.67
NEDD4P46934 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.24■□□□□ 0.67
NEDD4P46934 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEDD4P46934 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEDD4P46934 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.24■□□□□ 0.67
NEDD4P46934 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEDD4P46934 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NEDD4P46934 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NEDD4P46934 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NEDD4P46934 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.24■□□□□ 0.67
NEDD4P46934 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms