Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
USP8P40818 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.98■□□□□ 0.47
USP8P40818 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.98■□□□□ 0.47
USP8P40818 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.98■□□□□ 0.47
USP8P40818 AL662844.1-201ENST00000546340 181 ntBASIC17.98■□□□□ 0.47
USP8P40818 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.98■□□□□ 0.47
USP8P40818 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.98■□□□□ 0.47
USP8P40818 SLC25A6P4-201ENST00000586535 553 ntBASIC17.98■□□□□ 0.47
USP8P40818 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.98■□□□□ 0.47
USP8P40818 CYP2A7P1-201ENST00000595391 815 ntBASIC17.98■□□□□ 0.47
USP8P40818 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.98■□□□□ 0.47
USP8P40818 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.98■□□□□ 0.47
USP8P40818 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP8P40818 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.98■□□□□ 0.47
USP8P40818 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
USP8P40818 AC099063.4-201ENST00000641099 1602 ntBASIC17.98■□□□□ 0.47
USP8P40818 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.98■□□□□ 0.47
USP8P40818 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.98■□□□□ 0.47
USP8P40818 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
USP8P40818 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP8P40818 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP8P40818 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.97■□□□□ 0.47
USP8P40818 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP8P40818 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP8P40818 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP8P40818 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP8P40818 SNX33P1-201ENST00000592116 1762 ntBASIC17.97■□□□□ 0.47
USP8P40818 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP8P40818 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.97■□□□□ 0.47
USP8P40818 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP8P40818 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
USP8P40818 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
USP8P40818 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
USP8P40818 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
USP8P40818 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.97■□□□□ 0.47
USP8P40818 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.97■□□□□ 0.47
USP8P40818 AC079776.4-201ENST00000511039 504 ntBASIC17.97■□□□□ 0.47
USP8P40818 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.97■□□□□ 0.47
USP8P40818 AC087641.1-201ENST00000557561 1021 ntBASIC17.97■□□□□ 0.47
USP8P40818 OR7E47P-204ENST00000575924 449 ntBASIC17.97■□□□□ 0.47
USP8P40818 AC005412.3-201ENST00000580309 715 ntBASIC17.97■□□□□ 0.47
USP8P40818 AL121894.2-201ENST00000602977 491 ntBASIC17.97■□□□□ 0.47
USP8P40818 AP001350.2-201ENST00000625104 1094 ntBASIC17.97■□□□□ 0.47
USP8P40818 AL139011.1-202ENST00000642063 584 ntBASIC17.97■□□□□ 0.47
USP8P40818 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.97■□□□□ 0.47
USP8P40818 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP8P40818 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.97■□□□□ 0.47
USP8P40818 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.97■□□□□ 0.47
USP8P40818 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
USP8P40818 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.97■□□□□ 0.47
USP8P40818 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP8P40818 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP8P40818 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.97■□□□□ 0.47
USP8P40818 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.96■□□□□ 0.47
USP8P40818 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 AC006449.5-201ENST00000610658 2098 ntBASIC17.96■□□□□ 0.47
USP8P40818 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
USP8P40818 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
USP8P40818 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.96■□□□□ 0.47
USP8P40818 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
USP8P40818 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.96■□□□□ 0.47
USP8P40818 RNA5SP419-201ENST00000515908 135 ntBASIC17.96■□□□□ 0.47
USP8P40818 RNA5SP415-201ENST00000517246 115 ntBASIC17.96■□□□□ 0.47
USP8P40818 UNC93B6-202ENST00000528242 690 ntBASIC17.96■□□□□ 0.47
USP8P40818 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.96■□□□□ 0.47
USP8P40818 AC010654.1-201ENST00000615722 808 ntBASIC17.96■□□□□ 0.47
USP8P40818 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.96■□□□□ 0.47
USP8P40818 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.96■□□□□ 0.47
USP8P40818 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.96■□□□□ 0.47
USP8P40818 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP8P40818 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms