Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CEACAM3P40198 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
CEACAM3P40198 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.43□□□□□ -0.26
CEACAM3P40198 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CEACAM3P40198 CICP6-201ENST00000457191 2729 ntBASIC13.43□□□□□ -0.26
CEACAM3P40198 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CEACAM3P40198 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CEACAM3P40198 AC092919.2-201ENST00000623631 1645 ntBASIC13.43□□□□□ -0.26
CEACAM3P40198 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CEACAM3P40198 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.43□□□□□ -0.26
CEACAM3P40198 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CEACAM3P40198 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.43□□□□□ -0.26
CEACAM3P40198 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 HTR5BP-201ENST00000430851 1154 ntBASIC13.43□□□□□ -0.26
CEACAM3P40198 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 POU5F1P6-201ENST00000466990 990 ntBASIC13.43□□□□□ -0.26
CEACAM3P40198 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.43□□□□□ -0.26
CEACAM3P40198 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.43□□□□□ -0.26
CEACAM3P40198 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.43□□□□□ -0.26
CEACAM3P40198 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.43□□□□□ -0.26
CEACAM3P40198 AL078644.1-201ENST00000609881 752 ntBASIC13.43□□□□□ -0.26
CEACAM3P40198 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.43□□□□□ -0.26
CEACAM3P40198 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.43□□□□□ -0.26
CEACAM3P40198 AC018695.7-201ENST00000624587 2492 ntBASIC13.43□□□□□ -0.26
CEACAM3P40198 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.43□□□□□ -0.26
CEACAM3P40198 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CEACAM3P40198 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.43□□□□□ -0.26
CEACAM3P40198 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 GGT3P-204ENST00000453783 1664 ntBASIC13.43□□□□□ -0.26
CEACAM3P40198 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CEACAM3P40198 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.43□□□□□ -0.26
CEACAM3P40198 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CEACAM3P40198 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.43□□□□□ -0.26
CEACAM3P40198 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.42□□□□□ -0.26
CEACAM3P40198 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.42□□□□□ -0.26
CEACAM3P40198 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CEACAM3P40198 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 KRT18P13-201ENST00000400056 1290 ntBASIC13.42□□□□□ -0.26
CEACAM3P40198 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.42□□□□□ -0.26
CEACAM3P40198 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.42□□□□□ -0.26
CEACAM3P40198 AL671277.1-201ENST00000429656 993 ntBASIC13.42□□□□□ -0.26
CEACAM3P40198 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.42□□□□□ -0.26
CEACAM3P40198 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.42□□□□□ -0.26
CEACAM3P40198 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.42□□□□□ -0.26
CEACAM3P40198 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.42□□□□□ -0.26
CEACAM3P40198 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
CEACAM3P40198 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CEACAM3P40198 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.42□□□□□ -0.26
CEACAM3P40198 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.42□□□□□ -0.26
CEACAM3P40198 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CEACAM3P40198 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.42□□□□□ -0.26
CEACAM3P40198 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CEACAM3P40198 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms