Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PDE6BP35913 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PDE6BP35913 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6BP35913 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6BP35913 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6BP35913 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6BP35913 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6BP35913 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6BP35913 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.02■□□□□ 0.8
PDE6BP35913 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6BP35913 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6BP35913 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6BP35913 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.02■□□□□ 0.8
PDE6BP35913 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6BP35913 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6BP35913 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE6BP35913 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE6BP35913 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PDE6BP35913 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6BP35913 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE6BP35913 AC092933.1-201ENST00000393644 945 ntBASIC20.02■□□□□ 0.8
PDE6BP35913 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.02■□□□□ 0.8
PDE6BP35913 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDE6BP35913 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.02■□□□□ 0.8
PDE6BP35913 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE6BP35913 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.02■□□□□ 0.8
PDE6BP35913 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.02■□□□□ 0.8
PDE6BP35913 TDH-203ENST00000531764 1110 ntBASIC20.02■□□□□ 0.8
PDE6BP35913 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDE6BP35913 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.02■□□□□ 0.8
PDE6BP35913 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDE6BP35913 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PDE6BP35913 AC020907.1-201ENST00000616460 1350 ntBASIC20.02■□□□□ 0.8
PDE6BP35913 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDE6BP35913 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PDE6BP35913 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6BP35913 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.8
PDE6BP35913 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6BP35913 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6BP35913 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDE6BP35913 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.02■□□□□ 0.79
PDE6BP35913 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PDE6BP35913 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDE6BP35913 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.02■□□□□ 0.79
PDE6BP35913 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDE6BP35913 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.02■□□□□ 0.79
PDE6BP35913 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDE6BP35913 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.02■□□□□ 0.79
PDE6BP35913 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.01■□□□□ 0.79
PDE6BP35913 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PDE6BP35913 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.01■□□□□ 0.79
PDE6BP35913 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PDE6BP35913 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
PDE6BP35913 CSF2RBP1-201ENST00000447905 391 ntBASIC20.01■□□□□ 0.79
PDE6BP35913 FO681548.1-201ENST00000455617 1132 ntBASIC20.01■□□□□ 0.79
PDE6BP35913 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.01■□□□□ 0.79
PDE6BP35913 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.01■□□□□ 0.79
PDE6BP35913 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.01■□□□□ 0.79
PDE6BP35913 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 LINC01115-203ENST00000606068 577 ntBASIC20.01■□□□□ 0.79
PDE6BP35913 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.01■□□□□ 0.79
PDE6BP35913 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.01■□□□□ 0.79
PDE6BP35913 AL158212.4-201ENST00000624062 1286 ntBASIC20.01■□□□□ 0.79
PDE6BP35913 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PDE6BP35913 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6BP35913 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PDE6BP35913 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PDE6BP35913 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PDE6BP35913 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PDE6BP35913 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20■□□□□ 0.79
PDE6BP35913 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20■□□□□ 0.79
PDE6BP35913 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20■□□□□ 0.79
PDE6BP35913 BCYRN1-201ENST00000418539 200 ntBASIC20■□□□□ 0.79
PDE6BP35913 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20■□□□□ 0.79
PDE6BP35913 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20■□□□□ 0.79
PDE6BP35913 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20■□□□□ 0.79
PDE6BP35913 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDE6BP35913 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20■□□□□ 0.79
PDE6BP35913 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20■□□□□ 0.79
PDE6BP35913 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms