Protein–RNA interactions for Protein: P28290

SSFA2, Sperm-specific antigen 2, humanhuman

Predictions only

Length 1,259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2P28290 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
SSFA2P28290 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSFA2P28290 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SSFA2P28290 RNA5SP410-201ENST00000516285 106 ntBASIC21.03■□□□□ 0.96
SSFA2P28290 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.03■□□□□ 0.96
SSFA2P28290 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSFA2P28290 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.03■□□□□ 0.96
SSFA2P28290 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSFA2P28290 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SSFA2P28290 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.03■□□□□ 0.96
SSFA2P28290 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.03■□□□□ 0.96
SSFA2P28290 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSFA2P28290 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSFA2P28290 AC106886.4-201ENST00000623557 2502 ntBASIC21.03■□□□□ 0.96
SSFA2P28290 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SSFA2P28290 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SSFA2P28290 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSFA2P28290 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.02■□□□□ 0.96
SSFA2P28290 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSFA2P28290 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SSFA2P28290 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.02■□□□□ 0.96
SSFA2P28290 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SSFA2P28290 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSFA2P28290 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC21.02■□□□□ 0.96
SSFA2P28290 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SSFA2P28290 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSFA2P28290 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC21.02■□□□□ 0.96
SSFA2P28290 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSFA2P28290 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SSFA2P28290 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.02■□□□□ 0.96
SSFA2P28290 AC245100.3-201ENST00000441281 285 ntBASIC21.02■□□□□ 0.96
SSFA2P28290 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.02■□□□□ 0.96
SSFA2P28290 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SSFA2P28290 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SSFA2P28290 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.01■□□□□ 0.95
SSFA2P28290 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.01■□□□□ 0.95
SSFA2P28290 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SSFA2P28290 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.01■□□□□ 0.95
SSFA2P28290 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.01■□□□□ 0.95
SSFA2P28290 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.01■□□□□ 0.95
SSFA2P28290 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SSFA2P28290 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 FRMD8P1-201ENST00000440433 1524 ntBASIC21.01■□□□□ 0.95
SSFA2P28290 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SSFA2P28290 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.01■□□□□ 0.95
SSFA2P28290 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SSFA2P28290 TTTY23B-201ENST00000442790 549 ntBASIC21.01■□□□□ 0.95
SSFA2P28290 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 AC044860.1-202ENST00000559481 777 ntBASIC21.01■□□□□ 0.95
SSFA2P28290 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.01■□□□□ 0.95
SSFA2P28290 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.01■□□□□ 0.95
SSFA2P28290 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.01■□□□□ 0.95
SSFA2P28290 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.01■□□□□ 0.95
SSFA2P28290 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.01■□□□□ 0.95
SSFA2P28290 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.01■□□□□ 0.95
SSFA2P28290 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SSFA2P28290 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SSFA2P28290 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.01■□□□□ 0.95
SSFA2P28290 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.01■□□□□ 0.95
SSFA2P28290 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
SSFA2P28290 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 AC093525.9-201ENST00000624961 1746 ntBASIC21.01■□□□□ 0.95
SSFA2P28290 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.01■□□□□ 0.95
SSFA2P28290 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSFA2P28290 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21■□□□□ 0.95
SSFA2P28290 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21■□□□□ 0.95
SSFA2P28290 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21■□□□□ 0.95
SSFA2P28290 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SSFA2P28290 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSFA2P28290 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21■□□□□ 0.95
SSFA2P28290 AGGF1P2-201ENST00000426656 2106 ntBASIC21■□□□□ 0.95
SSFA2P28290 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SSFA2P28290 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21■□□□□ 0.95
SSFA2P28290 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21■□□□□ 0.95
SSFA2P28290 AL512343.1-201ENST00000605837 169 ntBASIC21■□□□□ 0.95
SSFA2P28290 AL033527.4-201ENST00000641026 673 ntBASIC21■□□□□ 0.95
SSFA2P28290 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SSFA2P28290 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SSFA2P28290 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SSFA2P28290 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC21■□□□□ 0.95
SSFA2P28290 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSFA2P28290 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
SSFA2P28290 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSFA2P28290 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSFA2P28290 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSFA2P28290 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SSFA2P28290 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SSFA2P28290 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms