Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.22■□□□□ 0.19
VARSP26640 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.22■□□□□ 0.19
VARSP26640 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
VARSP26640 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VARSP26640 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 AL671710.1-201ENST00000610245 2349 ntBASIC16.22■□□□□ 0.19
VARSP26640 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.21■□□□□ 0.19
VARSP26640 AC129492.6-201ENST00000611383 1305 ntBASIC16.21■□□□□ 0.19
VARSP26640 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VARSP26640 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.21■□□□□ 0.19
VARSP26640 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.21■□□□□ 0.19
VARSP26640 AC211486.1-202ENST00000416371 468 ntBASIC16.21■□□□□ 0.19
VARSP26640 AC211476.1-201ENST00000503899 468 ntBASIC16.21■□□□□ 0.19
VARSP26640 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
VARSP26640 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.21■□□□□ 0.19
VARSP26640 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VARSP26640 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.21■□□□□ 0.19
VARSP26640 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.21■□□□□ 0.19
VARSP26640 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 AC131009.4-201ENST00000624048 1740 ntBASIC16.21■□□□□ 0.19
VARSP26640 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VARSP26640 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VARSP26640 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
VARSP26640 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VARSP26640 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VARSP26640 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.21■□□□□ 0.18
VARSP26640 SNX33P1-201ENST00000592116 1762 ntBASIC16.21■□□□□ 0.18
VARSP26640 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VARSP26640 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
VARSP26640 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.2■□□□□ 0.18
VARSP26640 AP006288.1-201ENST00000446065 395 ntBASIC16.2■□□□□ 0.18
VARSP26640 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 HLA-J-202ENST00000469281 1241 ntBASIC16.2■□□□□ 0.18
VARSP26640 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.2■□□□□ 0.18
VARSP26640 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.2■□□□□ 0.18
VARSP26640 AC091167.2-201ENST00000579581 588 ntBASIC16.2■□□□□ 0.18
VARSP26640 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.2■□□□□ 0.18
VARSP26640 AC010654.1-201ENST00000615722 808 ntBASIC16.2■□□□□ 0.18
VARSP26640 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 AL353732.1-201ENST00000569618 1459 ntBASIC16.2■□□□□ 0.18
VARSP26640 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VARSP26640 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.2■□□□□ 0.18
VARSP26640 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VARSP26640 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.2■□□□□ 0.18
VARSP26640 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VARSP26640 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VARSP26640 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VARSP26640 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms