Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMLP26374 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMLP26374 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMLP26374 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CHMLP26374 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CHMLP26374 POLD2P1-201ENST00000511220 997 ntBASIC19.75■□□□□ 0.75
CHMLP26374 KRT18P58-201ENST00000527480 1120 ntBASIC19.75■□□□□ 0.75
CHMLP26374 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
CHMLP26374 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CHMLP26374 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.75■□□□□ 0.75
CHMLP26374 RARRES2P8-201ENST00000566335 367 ntBASIC19.75■□□□□ 0.75
CHMLP26374 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMLP26374 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
CHMLP26374 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
CHMLP26374 OR6D1P-203ENST00000641209 4860 ntBASIC19.75■□□□□ 0.75
CHMLP26374 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMLP26374 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMLP26374 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CHMLP26374 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
CHMLP26374 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMLP26374 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMLP26374 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMLP26374 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMLP26374 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMLP26374 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CHMLP26374 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CHMLP26374 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CHMLP26374 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CHMLP26374 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHMLP26374 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CHMLP26374 AL355306.1-201ENST00000415580 579 ntBASIC19.74■□□□□ 0.75
CHMLP26374 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMLP26374 ADH5P3-201ENST00000433842 1137 ntBASIC19.74■□□□□ 0.75
CHMLP26374 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.74■□□□□ 0.75
CHMLP26374 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMLP26374 AC073389.1-201ENST00000595595 795 ntBASIC19.74■□□□□ 0.75
CHMLP26374 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHMLP26374 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMLP26374 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMLP26374 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMLP26374 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
CHMLP26374 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMLP26374 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMLP26374 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.74■□□□□ 0.75
CHMLP26374 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
CHMLP26374 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMLP26374 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHMLP26374 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHMLP26374 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHMLP26374 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CHMLP26374 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMLP26374 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHMLP26374 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMLP26374 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 MCCD1P2-201ENST00000423228 335 ntBASIC19.73■□□□□ 0.75
CHMLP26374 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.73■□□□□ 0.75
CHMLP26374 FAM58CP-201ENST00000435741 640 ntBASIC19.73■□□□□ 0.75
CHMLP26374 AP000347.1-202ENST00000435868 847 ntBASIC19.73■□□□□ 0.75
CHMLP26374 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms