Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.81□□□□□ -0.2
LMO1P25800 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.81□□□□□ -0.2
LMO1P25800 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.81□□□□□ -0.2
LMO1P25800 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO1P25800 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LMO1P25800 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO1P25800 AC144831.1-201ENST00000573312 2656 ntBASIC13.81□□□□□ -0.2
LMO1P25800 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO1P25800 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO1P25800 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.81□□□□□ -0.2
LMO1P25800 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO1P25800 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO1P25800 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.81□□□□□ -0.2
LMO1P25800 AC005622.1-201ENST00000636801 1703 ntBASIC13.81□□□□□ -0.2
LMO1P25800 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO1P25800 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO1P25800 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
LMO1P25800 AC104109.2-201ENST00000602919 1418 ntBASIC13.81□□□□□ -0.2
LMO1P25800 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO1P25800 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO1P25800 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LMO1P25800 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LMO1P25800 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO1P25800 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 FAM45BP-202ENST00000592932 1624 ntBASIC13.8□□□□□ -0.2
LMO1P25800 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LMO1P25800 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
LMO1P25800 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.8□□□□□ -0.2
LMO1P25800 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO1P25800 AC140658.5-201ENST00000438532 169 ntBASIC13.8□□□□□ -0.2
LMO1P25800 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO1P25800 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.8□□□□□ -0.2
LMO1P25800 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO1P25800 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.8□□□□□ -0.2
LMO1P25800 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.8□□□□□ -0.2
LMO1P25800 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LMO1P25800 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.8□□□□□ -0.2
LMO1P25800 AC064836.3-201ENST00000607928 673 ntBASIC13.8□□□□□ -0.2
LMO1P25800 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LMO1P25800 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.8□□□□□ -0.2
LMO1P25800 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO1P25800 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LMO1P25800 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
LMO1P25800 U82695.1-201ENST00000635752 1889 ntBASIC13.8□□□□□ -0.2
LMO1P25800 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
LMO1P25800 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LMO1P25800 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.8□□□□□ -0.2
LMO1P25800 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LMO1P25800 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LMO1P25800 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO1P25800 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.8□□□□□ -0.2
LMO1P25800 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.8□□□□□ -0.2
LMO1P25800 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LMO1P25800 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
LMO1P25800 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.79□□□□□ -0.2
LMO1P25800 AP000347.1-202ENST00000435868 847 ntBASIC13.79□□□□□ -0.2
LMO1P25800 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO1P25800 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO1P25800 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO1P25800 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms