Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TNFSF4P23510 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.08□□□□□ -0.16
TNFSF4P23510 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TNFSF4P23510 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.08□□□□□ -0.16
TNFSF4P23510 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.08□□□□□ -0.16
TNFSF4P23510 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
TNFSF4P23510 AC254562.1-201ENST00000417586 456 ntBASIC14.08□□□□□ -0.16
TNFSF4P23510 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 AP000344.2-201ENST00000512987 629 ntBASIC14.08□□□□□ -0.16
TNFSF4P23510 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.08□□□□□ -0.16
TNFSF4P23510 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.08□□□□□ -0.16
TNFSF4P23510 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.08□□□□□ -0.16
TNFSF4P23510 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.08□□□□□ -0.16
TNFSF4P23510 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
TNFSF4P23510 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TNFSF4P23510 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TNFSF4P23510 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TNFSF4P23510 SNX33P1-201ENST00000592116 1762 ntBASIC14.07□□□□□ -0.16
TNFSF4P23510 GPAA1P2-202ENST00000606848 1787 ntBASIC14.07□□□□□ -0.16
TNFSF4P23510 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TNFSF4P23510 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
TNFSF4P23510 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.07□□□□□ -0.16
TNFSF4P23510 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TNFSF4P23510 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.07□□□□□ -0.16
TNFSF4P23510 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.07□□□□□ -0.16
TNFSF4P23510 AC004835.2-201ENST00000603762 682 ntBASIC14.07□□□□□ -0.16
TNFSF4P23510 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.07□□□□□ -0.16
TNFSF4P23510 AC134684.3-201ENST00000641758 218 ntBASIC14.07□□□□□ -0.16
TNFSF4P23510 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 AC018695.7-201ENST00000624587 2492 ntBASIC14.07□□□□□ -0.16
TNFSF4P23510 AL162727.3-201ENST00000635661 2787 ntBASIC14.07□□□□□ -0.16
TNFSF4P23510 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TNFSF4P23510 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TNFSF4P23510 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.07□□□□□ -0.16
TNFSF4P23510 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.07□□□□□ -0.16
TNFSF4P23510 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TNFSF4P23510 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.07□□□□□ -0.16
TNFSF4P23510 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TNFSF4P23510 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TNFSF4P23510 AC078925.2-201ENST00000624013 1973 ntBASIC14.07□□□□□ -0.16
TNFSF4P23510 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.07□□□□□ -0.16
TNFSF4P23510 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFSF4P23510 AL512652.2-201ENST00000625156 1716 ntBASIC14.07□□□□□ -0.16
TNFSF4P23510 AL596257.1-201ENST00000641463 2694 ntBASIC14.07□□□□□ -0.16
TNFSF4P23510 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 AC080080.1-201ENST00000625121 2420 ntBASIC14.06□□□□□ -0.16
TNFSF4P23510 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TNFSF4P23510 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
TNFSF4P23510 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFSF4P23510 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 AC106886.4-201ENST00000623557 2502 ntBASIC14.06□□□□□ -0.16
TNFSF4P23510 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms