Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CAPN3P20807 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.86■□□□□ 0.13
CAPN3P20807 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.86■□□□□ 0.13
CAPN3P20807 PGAM5P1-201ENST00000518923 814 ntBASIC15.86■□□□□ 0.13
CAPN3P20807 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 AC091167.2-201ENST00000579581 588 ntBASIC15.86■□□□□ 0.13
CAPN3P20807 NKAPP1-205ENST00000585790 367 ntBASIC15.86■□□□□ 0.13
CAPN3P20807 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.86■□□□□ 0.13
CAPN3P20807 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN3P20807 AC027601.4-201ENST00000611259 610 ntBASIC15.86■□□□□ 0.13
CAPN3P20807 AC010654.1-201ENST00000615722 808 ntBASIC15.86■□□□□ 0.13
CAPN3P20807 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN3P20807 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.85■□□□□ 0.13
CAPN3P20807 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.85■□□□□ 0.13
CAPN3P20807 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CAPN3P20807 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.85■□□□□ 0.13
CAPN3P20807 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.85■□□□□ 0.13
CAPN3P20807 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.85■□□□□ 0.13
CAPN3P20807 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.85■□□□□ 0.13
CAPN3P20807 AL591424.1-201ENST00000442569 1213 ntBASIC15.85■□□□□ 0.13
CAPN3P20807 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.85■□□□□ 0.13
CAPN3P20807 AC132008.2-207ENST00000454517 770 ntBASIC15.85■□□□□ 0.13
CAPN3P20807 AC018712.1-201ENST00000455767 687 ntBASIC15.85■□□□□ 0.13
CAPN3P20807 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.85■□□□□ 0.13
CAPN3P20807 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.85■□□□□ 0.13
CAPN3P20807 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.85■□□□□ 0.13
CAPN3P20807 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.85■□□□□ 0.13
CAPN3P20807 CYP2A7P1-201ENST00000595391 815 ntBASIC15.85■□□□□ 0.13
CAPN3P20807 AP001160.2-201ENST00000596071 487 ntBASIC15.85■□□□□ 0.13
CAPN3P20807 AC008608.2-201ENST00000606089 416 ntBASIC15.85■□□□□ 0.13
CAPN3P20807 FAM197Y3-203ENST00000618346 717 ntBASIC15.85■□□□□ 0.13
CAPN3P20807 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.85■□□□□ 0.13
CAPN3P20807 PRAL-201ENST00000624952 3286 ntBASIC15.85■□□□□ 0.13
CAPN3P20807 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 AC092850.2-201ENST00000623821 2697 ntBASIC15.85■□□□□ 0.13
CAPN3P20807 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CAPN3P20807 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CAPN3P20807 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CAPN3P20807 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.85■□□□□ 0.13
CAPN3P20807 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN3P20807 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.84■□□□□ 0.13
CAPN3P20807 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 AC013268.4-201ENST00000637413 2228 ntBASIC15.84■□□□□ 0.13
CAPN3P20807 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.84■□□□□ 0.13
CAPN3P20807 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.84■□□□□ 0.13
CAPN3P20807 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.84■□□□□ 0.13
CAPN3P20807 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.84■□□□□ 0.13
CAPN3P20807 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CAPN3P20807 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.84■□□□□ 0.13
CAPN3P20807 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CAPN3P20807 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.84■□□□□ 0.13
CAPN3P20807 DNAJB3-201ENST00000446806 729 ntBASIC15.84■□□□□ 0.13
CAPN3P20807 AC027796.2-201ENST00000575326 344 ntBASIC15.84■□□□□ 0.13
CAPN3P20807 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.84■□□□□ 0.13
CAPN3P20807 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CAPN3P20807 AL589182.2-201ENST00000619332 1049 ntBASIC15.84■□□□□ 0.13
CAPN3P20807 AC148477.8-201ENST00000624298 468 ntBASIC15.84■□□□□ 0.13
CAPN3P20807 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.84■□□□□ 0.13
CAPN3P20807 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.84■□□□□ 0.13
CAPN3P20807 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CAPN3P20807 AC069224.1-201ENST00000566372 1715 ntBASIC15.84■□□□□ 0.13
CAPN3P20807 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CAPN3P20807 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms