Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NFKB1P19838 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NFKB1P19838 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
NFKB1P19838 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.71■□□□□ 0.27
NFKB1P19838 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.71■□□□□ 0.27
NFKB1P19838 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NFKB1P19838 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NFKB1P19838 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NFKB1P19838 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NFKB1P19838 AC002056.1-201ENST00000395613 760 ntBASIC16.71■□□□□ 0.27
NFKB1P19838 KRT18P58-201ENST00000527480 1120 ntBASIC16.71■□□□□ 0.27
NFKB1P19838 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NFKB1P19838 AC099522.2-201ENST00000607001 744 ntBASIC16.71■□□□□ 0.27
NFKB1P19838 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NFKB1P19838 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NFKB1P19838 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NFKB1P19838 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NFKB1P19838 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NFKB1P19838 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NFKB1P19838 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.71■□□□□ 0.27
NFKB1P19838 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NFKB1P19838 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.7■□□□□ 0.26
NFKB1P19838 WASH6P-202ENST00000359512 1437 ntBASIC16.7■□□□□ 0.26
NFKB1P19838 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.7■□□□□ 0.26
NFKB1P19838 AL592424.1-201ENST00000563624 1536 ntBASIC16.7■□□□□ 0.26
NFKB1P19838 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
NFKB1P19838 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NFKB1P19838 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NFKB1P19838 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NFKB1P19838 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.7■□□□□ 0.26
NFKB1P19838 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NFKB1P19838 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.7■□□□□ 0.26
NFKB1P19838 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.7■□□□□ 0.26
NFKB1P19838 AC093724.1-201ENST00000448659 1027 ntBASIC16.7■□□□□ 0.26
NFKB1P19838 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NFKB1P19838 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NFKB1P19838 AC112191.1-201ENST00000523689 701 ntBASIC16.7■□□□□ 0.26
NFKB1P19838 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.7■□□□□ 0.26
NFKB1P19838 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.7■□□□□ 0.26
NFKB1P19838 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.7■□□□□ 0.26
NFKB1P19838 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.7■□□□□ 0.26
NFKB1P19838 AL161645.1-201ENST00000622716 1255 ntBASIC16.7■□□□□ 0.26
NFKB1P19838 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
NFKB1P19838 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NFKB1P19838 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.7■□□□□ 0.26
NFKB1P19838 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NFKB1P19838 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NFKB1P19838 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
NFKB1P19838 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.7■□□□□ 0.26
NFKB1P19838 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NFKB1P19838 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NFKB1P19838 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NFKB1P19838 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NFKB1P19838 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
NFKB1P19838 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.69■□□□□ 0.26
NFKB1P19838 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NFKB1P19838 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NFKB1P19838 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NFKB1P19838 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.69■□□□□ 0.26
NFKB1P19838 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.69■□□□□ 0.26
NFKB1P19838 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.69■□□□□ 0.26
NFKB1P19838 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.69■□□□□ 0.26
NFKB1P19838 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.69■□□□□ 0.26
NFKB1P19838 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.69■□□□□ 0.26
NFKB1P19838 PGAM5P1-201ENST00000518923 814 ntBASIC16.69■□□□□ 0.26
NFKB1P19838 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.69■□□□□ 0.26
NFKB1P19838 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NFKB1P19838 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.69■□□□□ 0.26
NFKB1P19838 AL671883.3-201ENST00000603274 991 ntBASIC16.69■□□□□ 0.26
NFKB1P19838 AC091812.2-201ENST00000619081 385 ntBASIC16.69■□□□□ 0.26
NFKB1P19838 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.69■□□□□ 0.26
NFKB1P19838 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.69■□□□□ 0.26
NFKB1P19838 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NFKB1P19838 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NFKB1P19838 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NFKB1P19838 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NFKB1P19838 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.69■□□□□ 0.26
NFKB1P19838 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NFKB1P19838 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.69■□□□□ 0.26
NFKB1P19838 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NFKB1P19838 U82695.1-201ENST00000635752 1889 ntBASIC16.69■□□□□ 0.26
NFKB1P19838 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NFKB1P19838 AC073439.1-201ENST00000624121 1774 ntBASIC16.69■□□□□ 0.26
NFKB1P19838 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NFKB1P19838 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NFKB1P19838 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.69■□□□□ 0.26
NFKB1P19838 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NFKB1P19838 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NFKB1P19838 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NFKB1P19838 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NFKB1P19838 AC024909.3-201ENST00000611513 2257 ntBASIC16.68■□□□□ 0.26
NFKB1P19838 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NFKB1P19838 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.68■□□□□ 0.26
NFKB1P19838 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
NFKB1P19838 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NFKB1P19838 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NFKB1P19838 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.68■□□□□ 0.26
NFKB1P19838 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NFKB1P19838 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.68■□□□□ 0.26
NFKB1P19838 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms