Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.1■□□□□ 0.49
SMPD1P17405 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SMPD1P17405 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.1■□□□□ 0.49
SMPD1P17405 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.1■□□□□ 0.49
SMPD1P17405 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.1■□□□□ 0.49
SMPD1P17405 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMPD1P17405 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.1■□□□□ 0.49
SMPD1P17405 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.1■□□□□ 0.49
SMPD1P17405 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.1■□□□□ 0.49
SMPD1P17405 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.1■□□□□ 0.49
SMPD1P17405 TIMM17BP1-201ENST00000545713 516 ntBASIC18.1■□□□□ 0.49
SMPD1P17405 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.1■□□□□ 0.49
SMPD1P17405 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.1■□□□□ 0.49
SMPD1P17405 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMPD1P17405 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMPD1P17405 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMPD1P17405 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMPD1P17405 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.1■□□□□ 0.49
SMPD1P17405 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMPD1P17405 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
SMPD1P17405 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.09■□□□□ 0.49
SMPD1P17405 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMPD1P17405 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.09■□□□□ 0.49
SMPD1P17405 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.09■□□□□ 0.49
SMPD1P17405 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.09■□□□□ 0.49
SMPD1P17405 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.09■□□□□ 0.49
SMPD1P17405 RRP7BP-205ENST00000566851 833 ntBASIC18.09■□□□□ 0.49
SMPD1P17405 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.09■□□□□ 0.49
SMPD1P17405 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.09■□□□□ 0.49
SMPD1P17405 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.09■□□□□ 0.49
SMPD1P17405 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.09■□□□□ 0.49
SMPD1P17405 TMEM261P1-201ENST00000604899 340 ntBASIC18.09■□□□□ 0.49
SMPD1P17405 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.09■□□□□ 0.49
SMPD1P17405 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.09■□□□□ 0.49
SMPD1P17405 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SMPD1P17405 AC078925.2-201ENST00000624013 1973 ntBASIC18.09■□□□□ 0.49
SMPD1P17405 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 CDC14C-201ENST00000428251 1719 ntBASIC18.09■□□□□ 0.49
SMPD1P17405 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.09■□□□□ 0.49
SMPD1P17405 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMPD1P17405 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.09■□□□□ 0.49
SMPD1P17405 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.08■□□□□ 0.49
SMPD1P17405 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMPD1P17405 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SMPD1P17405 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SMPD1P17405 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMPD1P17405 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.08■□□□□ 0.49
SMPD1P17405 HLA-A-202ENST00000376806 1854 ntBASIC18.08■□□□□ 0.49
SMPD1P17405 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.08■□□□□ 0.49
SMPD1P17405 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMPD1P17405 MIR658-201ENST00000385210 100 ntBASIC18.08■□□□□ 0.48
SMPD1P17405 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMPD1P17405 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.08■□□□□ 0.48
SMPD1P17405 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.08■□□□□ 0.48
SMPD1P17405 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.08■□□□□ 0.48
SMPD1P17405 AC022210.1-201ENST00000449856 793 ntBASIC18.08■□□□□ 0.48
SMPD1P17405 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.08■□□□□ 0.48
SMPD1P17405 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.08■□□□□ 0.48
SMPD1P17405 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.08■□□□□ 0.48
SMPD1P17405 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.08■□□□□ 0.48
SMPD1P17405 RARRES2P5-201ENST00000564013 466 ntBASIC18.08■□□□□ 0.48
SMPD1P17405 MIR6805-201ENST00000615055 62 ntBASIC18.08■□□□□ 0.48
SMPD1P17405 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.08■□□□□ 0.48
SMPD1P17405 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMPD1P17405 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMPD1P17405 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMPD1P17405 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMPD1P17405 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMPD1P17405 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SMPD1P17405 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMPD1P17405 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SMPD1P17405 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.07■□□□□ 0.48
SMPD1P17405 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMPD1P17405 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SMPD1P17405 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMPD1P17405 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMPD1P17405 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMPD1P17405 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SMPD1P17405 RPS2P32-201ENST00000439199 892 ntBASIC18.07■□□□□ 0.48
SMPD1P17405 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.07■□□□□ 0.48
SMPD1P17405 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMPD1P17405 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.07■□□□□ 0.48
SMPD1P17405 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.07■□□□□ 0.48
SMPD1P17405 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.07■□□□□ 0.48
SMPD1P17405 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.07■□□□□ 0.48
SMPD1P17405 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.07■□□□□ 0.48
SMPD1P17405 AL512343.1-201ENST00000605837 169 ntBASIC18.07■□□□□ 0.48
SMPD1P17405 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMPD1P17405 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms