Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.35■□□□□ 0.53
COL11A1P12107 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.35■□□□□ 0.53
COL11A1P12107 AC022211.2-201ENST00000585075 2527 ntBASIC18.35■□□□□ 0.53
COL11A1P12107 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL11A1P12107 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.35■□□□□ 0.53
COL11A1P12107 AC011676.5-201ENST00000624864 2660 ntBASIC18.35■□□□□ 0.53
COL11A1P12107 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL11A1P12107 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL11A1P12107 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 CDC14C-201ENST00000428251 1719 ntBASIC18.35■□□□□ 0.53
COL11A1P12107 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL11A1P12107 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
COL11A1P12107 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL11A1P12107 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.35■□□□□ 0.53
COL11A1P12107 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.35■□□□□ 0.53
COL11A1P12107 AL162726.2-201ENST00000438986 1017 ntBASIC18.35■□□□□ 0.53
COL11A1P12107 RN7SL752P-201ENST00000463779 287 ntBASIC18.35■□□□□ 0.53
COL11A1P12107 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.35■□□□□ 0.53
COL11A1P12107 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.35■□□□□ 0.53
COL11A1P12107 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.35■□□□□ 0.53
COL11A1P12107 AC243562.2-201ENST00000561247 970 ntBASIC18.35■□□□□ 0.53
COL11A1P12107 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.35■□□□□ 0.53
COL11A1P12107 AL049840.4-201ENST00000602422 811 ntBASIC18.35■□□□□ 0.53
COL11A1P12107 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.35■□□□□ 0.53
COL11A1P12107 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.35■□□□□ 0.53
COL11A1P12107 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.34■□□□□ 0.53
COL11A1P12107 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COL11A1P12107 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL11A1P12107 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COL11A1P12107 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
COL11A1P12107 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.34■□□□□ 0.53
COL11A1P12107 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL11A1P12107 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.34■□□□□ 0.53
COL11A1P12107 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.34■□□□□ 0.53
COL11A1P12107 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COL11A1P12107 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.34■□□□□ 0.53
COL11A1P12107 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.34■□□□□ 0.53
COL11A1P12107 AC004987.2-201ENST00000395959 1148 ntBASIC18.34■□□□□ 0.53
COL11A1P12107 KRT223P-202ENST00000449164 1292 ntBASIC18.34■□□□□ 0.53
COL11A1P12107 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.34■□□□□ 0.53
COL11A1P12107 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.34■□□□□ 0.53
COL11A1P12107 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.34■□□□□ 0.53
COL11A1P12107 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.34■□□□□ 0.53
COL11A1P12107 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.34■□□□□ 0.53
COL11A1P12107 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.34■□□□□ 0.53
COL11A1P12107 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.34■□□□□ 0.53
COL11A1P12107 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
COL11A1P12107 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.34■□□□□ 0.53
COL11A1P12107 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.34■□□□□ 0.53
COL11A1P12107 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL11A1P12107 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.34■□□□□ 0.53
COL11A1P12107 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL11A1P12107 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL11A1P12107 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.33■□□□□ 0.53
COL11A1P12107 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
COL11A1P12107 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL11A1P12107 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL11A1P12107 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL11A1P12107 MIR658-201ENST00000385210 100 ntBASIC18.33■□□□□ 0.53
COL11A1P12107 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.33■□□□□ 0.53
COL11A1P12107 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
COL11A1P12107 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.33■□□□□ 0.53
COL11A1P12107 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.33■□□□□ 0.53
COL11A1P12107 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.33■□□□□ 0.53
COL11A1P12107 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.33■□□□□ 0.53
COL11A1P12107 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.33■□□□□ 0.53
COL11A1P12107 AL162274.1-201ENST00000617191 1098 ntBASIC18.33■□□□□ 0.53
COL11A1P12107 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
COL11A1P12107 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL11A1P12107 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL11A1P12107 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL11A1P12107 AC018665.1-201ENST00000622927 1362 ntBASIC18.33■□□□□ 0.52
COL11A1P12107 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL11A1P12107 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
COL11A1P12107 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms