Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ERCC1P07992 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.63□□□□□ -0.07
ERCC1P07992 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ERCC1P07992 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC1P07992 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ERCC1P07992 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.63□□□□□ -0.07
ERCC1P07992 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC1P07992 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.63□□□□□ -0.07
ERCC1P07992 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.63□□□□□ -0.07
ERCC1P07992 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.63□□□□□ -0.07
ERCC1P07992 AC004832.2-201ENST00000426397 482 ntBASIC14.63□□□□□ -0.07
ERCC1P07992 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.63□□□□□ -0.07
ERCC1P07992 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC1P07992 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.63□□□□□ -0.07
ERCC1P07992 PGAM5P1-201ENST00000518923 814 ntBASIC14.63□□□□□ -0.07
ERCC1P07992 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
ERCC1P07992 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC1P07992 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ERCC1P07992 AC139530.3-201ENST00000620344 690 ntBASIC14.63□□□□□ -0.07
ERCC1P07992 AC004790.2-201ENST00000623588 572 ntBASIC14.63□□□□□ -0.07
ERCC1P07992 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 KRT8P49-201ENST00000604166 1432 ntBASIC14.63□□□□□ -0.07
ERCC1P07992 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
ERCC1P07992 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ERCC1P07992 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC1P07992 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
ERCC1P07992 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ERCC1P07992 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.62□□□□□ -0.07
ERCC1P07992 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ERCC1P07992 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
ERCC1P07992 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ERCC1P07992 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
ERCC1P07992 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ERCC1P07992 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ERCC1P07992 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ERCC1P07992 UPF3AP3-201ENST00000420996 769 ntBASIC14.62□□□□□ -0.07
ERCC1P07992 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.62□□□□□ -0.07
ERCC1P07992 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.62□□□□□ -0.07
ERCC1P07992 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ERCC1P07992 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.62□□□□□ -0.07
ERCC1P07992 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.62□□□□□ -0.07
ERCC1P07992 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.62□□□□□ -0.07
ERCC1P07992 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ERCC1P07992 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.62□□□□□ -0.07
ERCC1P07992 AC007950.2-201ENST00000615045 2347 ntBASIC14.62□□□□□ -0.07
ERCC1P07992 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.62□□□□□ -0.07
ERCC1P07992 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ERCC1P07992 AC007064.4-201ENST00000637740 555 ntBASIC14.62□□□□□ -0.07
ERCC1P07992 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ERCC1P07992 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.62□□□□□ -0.07
ERCC1P07992 MIR600HG-201ENST00000449175 5984 ntBASIC14.62□□□□□ -0.07
ERCC1P07992 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.62□□□□□ -0.07
ERCC1P07992 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 ME2P1-201ENST00000426028 1970 ntBASIC14.62□□□□□ -0.07
ERCC1P07992 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC1P07992 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.61□□□□□ -0.07
ERCC1P07992 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC1P07992 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ERCC1P07992 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms