Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
RETP07949 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RETP07949 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RETP07949 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 PCDHA14-201ENST00000506751 2298 ntBASIC16.53■□□□□ 0.24
RETP07949 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.53■□□□□ 0.24
RETP07949 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
RETP07949 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RETP07949 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RETP07949 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.53■□□□□ 0.24
RETP07949 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
RETP07949 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.53■□□□□ 0.24
RETP07949 AC135586.1-201ENST00000539323 574 ntBASIC16.53■□□□□ 0.24
RETP07949 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.53■□□□□ 0.24
RETP07949 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RETP07949 AC091167.2-201ENST00000579581 588 ntBASIC16.53■□□□□ 0.24
RETP07949 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.53■□□□□ 0.24
RETP07949 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.53■□□□□ 0.24
RETP07949 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 AL589739.1-201ENST00000607720 493 ntBASIC16.53■□□□□ 0.24
RETP07949 AC004840.1-201ENST00000636359 365 ntBASIC16.53■□□□□ 0.24
RETP07949 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RETP07949 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RETP07949 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 AC018695.7-201ENST00000624587 2492 ntBASIC16.53■□□□□ 0.24
RETP07949 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.53■□□□□ 0.24
RETP07949 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RETP07949 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RETP07949 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RETP07949 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.52■□□□□ 0.24
RETP07949 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.52■□□□□ 0.24
RETP07949 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RETP07949 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RETP07949 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
RETP07949 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RETP07949 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RETP07949 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
RETP07949 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RETP07949 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.52■□□□□ 0.24
RETP07949 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.52■□□□□ 0.24
RETP07949 GNAQP1-201ENST00000444815 1067 ntBASIC16.52■□□□□ 0.24
RETP07949 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RETP07949 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.52■□□□□ 0.24
RETP07949 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.52■□□□□ 0.24
RETP07949 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.52■□□□□ 0.24
RETP07949 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RETP07949 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RETP07949 AC073389.1-201ENST00000595595 795 ntBASIC16.52■□□□□ 0.24
RETP07949 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.52■□□□□ 0.24
RETP07949 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.52■□□□□ 0.24
RETP07949 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RETP07949 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.52■□□□□ 0.24
RETP07949 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.52■□□□□ 0.23
RETP07949 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RETP07949 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RETP07949 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RETP07949 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RETP07949 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RETP07949 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RETP07949 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RETP07949 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RETP07949 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RETP07949 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.51■□□□□ 0.23
RETP07949 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RETP07949 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RETP07949 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RETP07949 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RETP07949 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RETP07949 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.51■□□□□ 0.23
RETP07949 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RETP07949 HLA-H-201ENST00000383620 1096 ntBASIC16.51■□□□□ 0.23
RETP07949 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.51■□□□□ 0.23
RETP07949 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RETP07949 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.51■□□□□ 0.23
RETP07949 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.51■□□□□ 0.23
RETP07949 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.51■□□□□ 0.23
RETP07949 AC093004.1-201ENST00000508850 424 ntBASIC16.51■□□□□ 0.23
RETP07949 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.51■□□□□ 0.23
RETP07949 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.51■□□□□ 0.23
RETP07949 FAM8A2P-201ENST00000528813 1142 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms