Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL5A2P05997 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL5A2P05997 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC21.21■□□□□ 0.99
COL5A2P05997 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC21.21■□□□□ 0.99
COL5A2P05997 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.21■□□□□ 0.99
COL5A2P05997 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL5A2P05997 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL5A2P05997 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.21■□□□□ 0.99
COL5A2P05997 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.21■□□□□ 0.99
COL5A2P05997 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL5A2P05997 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
COL5A2P05997 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.21■□□□□ 0.99
COL5A2P05997 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL5A2P05997 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.21■□□□□ 0.99
COL5A2P05997 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC21.21■□□□□ 0.99
COL5A2P05997 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC21.21■□□□□ 0.99
COL5A2P05997 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL5A2P05997 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL5A2P05997 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC21.2■□□□□ 0.98
COL5A2P05997 AC016694.1-201ENST00000434179 700 ntBASIC21.2■□□□□ 0.98
COL5A2P05997 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
COL5A2P05997 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC21.2■□□□□ 0.98
COL5A2P05997 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.2■□□□□ 0.98
COL5A2P05997 RNA5SP423-201ENST00000517127 109 ntBASIC21.2■□□□□ 0.98
COL5A2P05997 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21.2■□□□□ 0.98
COL5A2P05997 AC243562.2-201ENST00000561247 970 ntBASIC21.2■□□□□ 0.98
COL5A2P05997 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC21.2■□□□□ 0.98
COL5A2P05997 AC009486.1-201ENST00000569860 813 ntBASIC21.2■□□□□ 0.98
COL5A2P05997 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.2■□□□□ 0.98
COL5A2P05997 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC21.2■□□□□ 0.98
COL5A2P05997 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.2■□□□□ 0.98
COL5A2P05997 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.2■□□□□ 0.98
COL5A2P05997 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
COL5A2P05997 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COL5A2P05997 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
COL5A2P05997 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL5A2P05997 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.2■□□□□ 0.98
COL5A2P05997 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL5A2P05997 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL5A2P05997 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL5A2P05997 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL5A2P05997 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL5A2P05997 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
COL5A2P05997 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COL5A2P05997 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
COL5A2P05997 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL5A2P05997 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
COL5A2P05997 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.2■□□□□ 0.98
COL5A2P05997 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.2■□□□□ 0.98
COL5A2P05997 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC21.2■□□□□ 0.98
COL5A2P05997 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.2■□□□□ 0.98
COL5A2P05997 METTL26-214ENST00000614890 801 ntTSL 3 BASIC21.2■□□□□ 0.98
COL5A2P05997 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.2■□□□□ 0.98
COL5A2P05997 AC008687.7-202ENST00000637404 953 ntBASIC21.2■□□□□ 0.98
COL5A2P05997 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL5A2P05997 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL5A2P05997 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.19■□□□□ 0.98
COL5A2P05997 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
COL5A2P05997 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC21.19■□□□□ 0.98
COL5A2P05997 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL5A2P05997 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL5A2P05997 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.19■□□□□ 0.98
COL5A2P05997 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL5A2P05997 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC21.19■□□□□ 0.98
COL5A2P05997 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC21.19■□□□□ 0.98
COL5A2P05997 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.19■□□□□ 0.98
COL5A2P05997 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL5A2P05997 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC21.19■□□□□ 0.98
COL5A2P05997 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL5A2P05997 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL5A2P05997 NEFHP1-201ENST00000412845 2629 ntBASIC21.19■□□□□ 0.98
COL5A2P05997 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL5A2P05997 AC134312.5-201ENST00000568031 1313 ntBASIC21.19■□□□□ 0.98
COL5A2P05997 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
COL5A2P05997 NOC2LP2-201ENST00000407594 1944 ntBASIC21.18■□□□□ 0.98
COL5A2P05997 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
COL5A2P05997 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
COL5A2P05997 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.18■□□□□ 0.98
COL5A2P05997 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC21.18■□□□□ 0.98
COL5A2P05997 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
COL5A2P05997 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC21.18■□□□□ 0.98
COL5A2P05997 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
COL5A2P05997 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
COL5A2P05997 PPA1-206ENST00000625364 644 ntTSL 5 BASIC21.18■□□□□ 0.98
COL5A2P05997 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL5A2P05997 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
COL5A2P05997 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.18■□□□□ 0.98
COL5A2P05997 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.18■□□□□ 0.98
COL5A2P05997 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms