Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR3DP05423 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR3DP05423 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR3DP05423 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
POLR3DP05423 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.6■□□□□ 0.73
POLR3DP05423 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR3DP05423 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR3DP05423 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR3DP05423 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR3DP05423 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
POLR3DP05423 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
POLR3DP05423 FAM8A3P-201ENST00000427218 844 ntBASIC19.6■□□□□ 0.73
POLR3DP05423 AC055876.3-201ENST00000431496 288 ntBASIC19.6■□□□□ 0.73
POLR3DP05423 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.6■□□□□ 0.73
POLR3DP05423 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.6■□□□□ 0.73
POLR3DP05423 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR3DP05423 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.6■□□□□ 0.73
POLR3DP05423 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
POLR3DP05423 AC140878.1-201ENST00000565277 250 ntBASIC19.6■□□□□ 0.73
POLR3DP05423 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.6■□□□□ 0.73
POLR3DP05423 AC138649.4-201ENST00000612222 287 ntBASIC19.6■□□□□ 0.73
POLR3DP05423 AC003101.2-201ENST00000612557 442 ntBASIC19.6■□□□□ 0.73
POLR3DP05423 AC018529.1-201ENST00000613063 361 ntBASIC19.6■□□□□ 0.73
POLR3DP05423 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.6■□□□□ 0.73
POLR3DP05423 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR3DP05423 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR3DP05423 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
POLR3DP05423 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
POLR3DP05423 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR3DP05423 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR3DP05423 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR3DP05423 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR3DP05423 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.59■□□□□ 0.73
POLR3DP05423 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
POLR3DP05423 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.59■□□□□ 0.73
POLR3DP05423 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR3DP05423 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
POLR3DP05423 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR3DP05423 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR3DP05423 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR3DP05423 TREML5P-201ENST00000421694 576 ntBASIC19.59■□□□□ 0.73
POLR3DP05423 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR3DP05423 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.59■□□□□ 0.73
POLR3DP05423 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR3DP05423 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.59■□□□□ 0.73
POLR3DP05423 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.59■□□□□ 0.73
POLR3DP05423 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR3DP05423 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.59■□□□□ 0.73
POLR3DP05423 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.59■□□□□ 0.73
POLR3DP05423 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.59■□□□□ 0.73
POLR3DP05423 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.59■□□□□ 0.73
POLR3DP05423 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.59■□□□□ 0.73
POLR3DP05423 AC020765.3-201ENST00000613051 740 ntBASIC19.59■□□□□ 0.73
POLR3DP05423 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
POLR3DP05423 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR3DP05423 AL031731.1-201ENST00000642131 2094 ntBASIC19.59■□□□□ 0.73
POLR3DP05423 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR3DP05423 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR3DP05423 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
POLR3DP05423 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.59■□□□□ 0.73
POLR3DP05423 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
POLR3DP05423 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR3DP05423 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR3DP05423 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR3DP05423 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
POLR3DP05423 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
POLR3DP05423 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.58■□□□□ 0.73
POLR3DP05423 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.58■□□□□ 0.73
POLR3DP05423 FO538757.1-201ENST00000623083 1397 ntBASIC19.58■□□□□ 0.73
POLR3DP05423 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
POLR3DP05423 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
POLR3DP05423 AC006538.1-201ENST00000567905 1585 ntBASIC19.58■□□□□ 0.73
POLR3DP05423 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
POLR3DP05423 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
POLR3DP05423 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
POLR3DP05423 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
POLR3DP05423 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
POLR3DP05423 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR3DP05423 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.58■□□□□ 0.72
POLR3DP05423 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.58■□□□□ 0.72
POLR3DP05423 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.58■□□□□ 0.72
POLR3DP05423 BCRP1-201ENST00000444246 691 ntBASIC19.58■□□□□ 0.72
POLR3DP05423 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.58■□□□□ 0.72
POLR3DP05423 IGHV3-42-201ENST00000520410 361 ntBASIC19.58■□□□□ 0.72
POLR3DP05423 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.58■□□□□ 0.72
POLR3DP05423 AL096865.1-201ENST00000606796 927 ntBASIC19.58■□□□□ 0.72
POLR3DP05423 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
POLR3DP05423 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.58■□□□□ 0.72
POLR3DP05423 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR3DP05423 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
POLR3DP05423 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.58■□□□□ 0.72
POLR3DP05423 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR3DP05423 AL662844.4-201ENST00000606367 2838 ntBASIC19.58■□□□□ 0.72
POLR3DP05423 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
POLR3DP05423 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR3DP05423 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR3DP05423 PCDH8P1-201ENST00000428983 2773 ntBASIC19.58■□□□□ 0.72
POLR3DP05423 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.58■□□□□ 0.72
POLR3DP05423 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR3DP05423 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms