Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCCBP05166 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCCBP05166 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCCBP05166 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCCBP05166 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCCBP05166 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCCBP05166 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCCBP05166 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
PCCBP05166 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.22■□□□□ 0.19
PCCBP05166 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCCBP05166 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PCCBP05166 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCCBP05166 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 FAM8A3P-201ENST00000427218 844 ntBASIC16.22■□□□□ 0.19
PCCBP05166 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.22■□□□□ 0.19
PCCBP05166 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.22■□□□□ 0.19
PCCBP05166 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PCCBP05166 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.22■□□□□ 0.19
PCCBP05166 AC097493.3-201ENST00000509725 367 ntBASIC16.22■□□□□ 0.19
PCCBP05166 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.22■□□□□ 0.19
PCCBP05166 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.22■□□□□ 0.19
PCCBP05166 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.22■□□□□ 0.19
PCCBP05166 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.22■□□□□ 0.19
PCCBP05166 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
PCCBP05166 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 AC092364.2-202ENST00000597012 1073 ntBASIC16.22■□□□□ 0.19
PCCBP05166 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.22■□□□□ 0.19
PCCBP05166 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.22■□□□□ 0.19
PCCBP05166 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCCBP05166 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.22■□□□□ 0.19
PCCBP05166 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCCBP05166 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.22■□□□□ 0.19
PCCBP05166 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCCBP05166 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.21■□□□□ 0.19
PCCBP05166 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PCCBP05166 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.21■□□□□ 0.19
PCCBP05166 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCCBP05166 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.21■□□□□ 0.19
PCCBP05166 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.21■□□□□ 0.19
PCCBP05166 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.21■□□□□ 0.19
PCCBP05166 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.21■□□□□ 0.19
PCCBP05166 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.21■□□□□ 0.19
PCCBP05166 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.21■□□□□ 0.19
PCCBP05166 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PCCBP05166 INGX-202ENST00000489074 768 ntBASIC16.21■□□□□ 0.19
PCCBP05166 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.21■□□□□ 0.19
PCCBP05166 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PCCBP05166 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.21■□□□□ 0.19
PCCBP05166 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 AL096865.1-201ENST00000606796 927 ntBASIC16.21■□□□□ 0.19
PCCBP05166 SPDYE12P-201ENST00000618416 771 ntBASIC16.21■□□□□ 0.19
PCCBP05166 AC073592.8-201ENST00000624126 511 ntBASIC16.21■□□□□ 0.19
PCCBP05166 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PCCBP05166 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
PCCBP05166 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.21■□□□□ 0.19
PCCBP05166 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCCBP05166 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCCBP05166 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms