Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
KRT6AP02538 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
KRT6AP02538 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT6AP02538 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
KRT6AP02538 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
KRT6AP02538 AC108751.1-201ENST00000490852 363 ntBASIC15.96■□□□□ 0.15
KRT6AP02538 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.96■□□□□ 0.15
KRT6AP02538 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT6AP02538 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
KRT6AP02538 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
KRT6AP02538 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT6AP02538 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.96■□□□□ 0.15
KRT6AP02538 AL691432.3-201ENST00000621860 400 ntBASIC15.96■□□□□ 0.15
KRT6AP02538 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.96■□□□□ 0.15
KRT6AP02538 AL645728.2-201ENST00000641974 660 ntBASIC15.96■□□□□ 0.15
KRT6AP02538 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT6AP02538 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
KRT6AP02538 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
KRT6AP02538 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.96■□□□□ 0.15
KRT6AP02538 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT6AP02538 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
KRT6AP02538 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.96■□□□□ 0.14
KRT6AP02538 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT6AP02538 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.95■□□□□ 0.14
KRT6AP02538 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 REXO1L8P-201ENST00000604378 1897 ntBASIC15.95■□□□□ 0.14
KRT6AP02538 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 AL365203.3-201ENST00000609742 2057 ntBASIC15.95■□□□□ 0.14
KRT6AP02538 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
KRT6AP02538 AL136379.1-201ENST00000623471 2642 ntBASIC15.95■□□□□ 0.14
KRT6AP02538 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT6AP02538 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT6AP02538 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.95■□□□□ 0.14
KRT6AP02538 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT6AP02538 AL031284.1-201ENST00000419297 478 ntBASIC15.95■□□□□ 0.14
KRT6AP02538 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.95■□□□□ 0.14
KRT6AP02538 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.95■□□□□ 0.14
KRT6AP02538 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.95■□□□□ 0.14
KRT6AP02538 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
KRT6AP02538 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.95■□□□□ 0.14
KRT6AP02538 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
KRT6AP02538 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.95■□□□□ 0.14
KRT6AP02538 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT6AP02538 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
KRT6AP02538 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT6AP02538 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.95■□□□□ 0.14
KRT6AP02538 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT6AP02538 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.95■□□□□ 0.14
KRT6AP02538 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT6AP02538 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT6AP02538 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT6AP02538 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT6AP02538 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KRT6AP02538 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
KRT6AP02538 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT6AP02538 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT6AP02538 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT6AP02538 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
KRT6AP02538 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms