Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.8□□□□□ -0.2
ABCA1O95477 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ABCA1O95477 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 SLC22A20-204ENST00000530038 1673 ntBASIC13.8□□□□□ -0.2
ABCA1O95477 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.8□□□□□ -0.2
ABCA1O95477 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ABCA1O95477 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.79□□□□□ -0.2
ABCA1O95477 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ABCA1O95477 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ABCA1O95477 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ABCA1O95477 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ABCA1O95477 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 AC079776.1-201ENST00000401540 1152 ntBASIC13.79□□□□□ -0.2
ABCA1O95477 AC105233.2-201ENST00000523697 349 ntBASIC13.79□□□□□ -0.2
ABCA1O95477 AF228730.5-201ENST00000530288 346 ntBASIC13.79□□□□□ -0.2
ABCA1O95477 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
ABCA1O95477 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ABCA1O95477 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ABCA1O95477 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ABCA1O95477 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
ABCA1O95477 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
ABCA1O95477 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.79□□□□□ -0.2
ABCA1O95477 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.79□□□□□ -0.2
ABCA1O95477 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.79□□□□□ -0.2
ABCA1O95477 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.79□□□□□ -0.2
ABCA1O95477 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
ABCA1O95477 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
ABCA1O95477 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
ABCA1O95477 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.79□□□□□ -0.2
ABCA1O95477 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ABCA1O95477 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA1O95477 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA1O95477 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ABCA1O95477 AL353779.1-201ENST00000434793 351 ntBASIC13.78□□□□□ -0.2
ABCA1O95477 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.78□□□□□ -0.2
ABCA1O95477 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.78□□□□□ -0.2
ABCA1O95477 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.78□□□□□ -0.2
ABCA1O95477 AC016027.1-202ENST00000607927 1699 ntBASIC13.78□□□□□ -0.2
ABCA1O95477 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ABCA1O95477 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.78□□□□□ -0.2
ABCA1O95477 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.78□□□□□ -0.2
ABCA1O95477 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ABCA1O95477 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ABCA1O95477 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.78□□□□□ -0.2
ABCA1O95477 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ABCA1O95477 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.78□□□□□ -0.2
ABCA1O95477 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ABCA1O95477 AL132655.2-201ENST00000596276 594 ntBASIC13.78□□□□□ -0.2
ABCA1O95477 AC004233.3-201ENST00000607794 1269 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms