Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.79■□□□□ 0.12
SEMA3DO95025 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.79■□□□□ 0.12
SEMA3DO95025 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SEMA3DO95025 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEMA3DO95025 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.78■□□□□ 0.12
SEMA3DO95025 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SEMA3DO95025 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.78■□□□□ 0.12
SEMA3DO95025 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 AL365209.1-201ENST00000624418 6473 ntBASIC15.78■□□□□ 0.12
SEMA3DO95025 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.78■□□□□ 0.12
SEMA3DO95025 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.78■□□□□ 0.12
SEMA3DO95025 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.78■□□□□ 0.12
SEMA3DO95025 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.78■□□□□ 0.12
SEMA3DO95025 AC140658.5-201ENST00000438532 169 ntBASIC15.78■□□□□ 0.12
SEMA3DO95025 AL591424.1-201ENST00000442569 1213 ntBASIC15.78■□□□□ 0.12
SEMA3DO95025 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.78■□□□□ 0.12
SEMA3DO95025 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.78■□□□□ 0.12
SEMA3DO95025 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.78■□□□□ 0.12
SEMA3DO95025 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.78■□□□□ 0.12
SEMA3DO95025 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.78■□□□□ 0.12
SEMA3DO95025 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.78■□□□□ 0.12
SEMA3DO95025 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.78■□□□□ 0.12
SEMA3DO95025 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.78■□□□□ 0.12
SEMA3DO95025 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.78■□□□□ 0.12
SEMA3DO95025 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.78■□□□□ 0.12
SEMA3DO95025 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.78■□□□□ 0.12
SEMA3DO95025 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.78■□□□□ 0.12
SEMA3DO95025 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SEMA3DO95025 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.78■□□□□ 0.12
SEMA3DO95025 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.78■□□□□ 0.12
SEMA3DO95025 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.78■□□□□ 0.12
SEMA3DO95025 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SEMA3DO95025 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SEMA3DO95025 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEMA3DO95025 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SEMA3DO95025 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SEMA3DO95025 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SEMA3DO95025 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SEMA3DO95025 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SEMA3DO95025 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.77■□□□□ 0.12
SEMA3DO95025 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.77■□□□□ 0.12
SEMA3DO95025 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SEMA3DO95025 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SEMA3DO95025 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SEMA3DO95025 BCAR1-209ENST00000546196 1340 ntBASIC15.77■□□□□ 0.12
SEMA3DO95025 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SEMA3DO95025 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.77■□□□□ 0.12
SEMA3DO95025 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
SEMA3DO95025 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SEMA3DO95025 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SEMA3DO95025 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
SEMA3DO95025 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.77■□□□□ 0.12
SEMA3DO95025 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.77■□□□□ 0.12
SEMA3DO95025 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.77■□□□□ 0.12
SEMA3DO95025 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SEMA3DO95025 KRT19P2-202ENST00000557173 1012 ntBASIC15.77■□□□□ 0.12
SEMA3DO95025 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.77■□□□□ 0.12
SEMA3DO95025 AC004877.2-201ENST00000623941 599 ntBASIC15.77■□□□□ 0.12
SEMA3DO95025 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.77■□□□□ 0.12
SEMA3DO95025 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.77■□□□□ 0.12
SEMA3DO95025 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SEMA3DO95025 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SEMA3DO95025 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SEMA3DO95025 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.77■□□□□ 0.11
SEMA3DO95025 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SEMA3DO95025 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SEMA3DO95025 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SEMA3DO95025 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.77■□□□□ 0.11
SEMA3DO95025 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SEMA3DO95025 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SEMA3DO95025 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SEMA3DO95025 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.77■□□□□ 0.11
SEMA3DO95025 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SEMA3DO95025 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SEMA3DO95025 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
SEMA3DO95025 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.77■□□□□ 0.11
SEMA3DO95025 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SEMA3DO95025 AL513523.2-202ENST00000427283 2040 ntBASIC15.77■□□□□ 0.11
SEMA3DO95025 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.77■□□□□ 0.11
SEMA3DO95025 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SEMA3DO95025 AC025580.3-201ENST00000617932 1424 ntBASIC15.77■□□□□ 0.11
SEMA3DO95025 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms