Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.36■■□□□ 1.01
LTN1O94822 BOLA2P3-201ENST00000404566 256 ntBASIC21.36■■□□□ 1.01
LTN1O94822 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC21.36■■□□□ 1.01
LTN1O94822 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC21.36■■□□□ 1.01
LTN1O94822 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 TECR-220ENST00000600083 1204 ntTSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.36■■□□□ 1.01
LTN1O94822 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 AMT-233ENST00000636522 1620 ntTSL 2 BASIC21.35■■□□□ 1.01
LTN1O94822 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.35■■□□□ 1.01
LTN1O94822 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC21.35■■□□□ 1.01
LTN1O94822 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.35■■□□□ 1.01
LTN1O94822 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
LTN1O94822 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.35■■□□□ 1.01
LTN1O94822 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
LTN1O94822 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.35■■□□□ 1.01
LTN1O94822 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LTN1O94822 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
LTN1O94822 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 KRT8P22-201ENST00000562317 1415 ntBASIC21.35■■□□□ 1.01
LTN1O94822 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LTN1O94822 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC21.35■■□□□ 1.01
LTN1O94822 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.35■■□□□ 1.01
LTN1O94822 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.35■■□□□ 1.01
LTN1O94822 AC106760.1-201ENST00000508690 800 ntBASIC21.35■■□□□ 1.01
LTN1O94822 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC21.35■■□□□ 1.01
LTN1O94822 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.35■■□□□ 1.01
LTN1O94822 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LTN1O94822 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.35■■□□□ 1.01
LTN1O94822 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LTN1O94822 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
LTN1O94822 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LTN1O94822 TP73-213ENST00000604479 1623 ntTSL 5 BASIC21.34■■□□□ 1.01
LTN1O94822 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LTN1O94822 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC21.34■■□□□ 1.01
LTN1O94822 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC21.34■■□□□ 1.01
LTN1O94822 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC21.34■■□□□ 1.01
LTN1O94822 USB1-203ENST00000539737 1212 ntTSL 2 BASIC21.34■■□□□ 1.01
LTN1O94822 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC21.34■■□□□ 1.01
LTN1O94822 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.34■■□□□ 1.01
LTN1O94822 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.34■■□□□ 1.01
LTN1O94822 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTN1O94822 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.33■■□□□ 1.01
LTN1O94822 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LTN1O94822 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LTN1O94822 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LTN1O94822 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
LTN1O94822 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LTN1O94822 AC136604.1-201ENST00000418535 575 ntBASIC21.33■■□□□ 1.01
LTN1O94822 CSF2RBP1-201ENST00000447905 391 ntBASIC21.33■■□□□ 1.01
LTN1O94822 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
LTN1O94822 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
LTN1O94822 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.33■■□□□ 1.01
LTN1O94822 AC244669.2-201ENST00000612320 853 ntBASIC21.33■■□□□ 1.01
LTN1O94822 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
LTN1O94822 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
LTN1O94822 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LTN1O94822 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
LTN1O94822 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LTN1O94822 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC21.33■■□□□ 1.01
LTN1O94822 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC21.33■■□□□ 1.01
LTN1O94822 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms