Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN11O75508 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.72■□□□□ 0.27
CLDN11O75508 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN11O75508 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN11O75508 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN11O75508 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN11O75508 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLDN11O75508 AC125807.1-201ENST00000483097 614 ntBASIC16.72■□□□□ 0.27
CLDN11O75508 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN11O75508 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN11O75508 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN11O75508 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN11O75508 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN11O75508 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN11O75508 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN11O75508 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN11O75508 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLDN11O75508 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN11O75508 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN11O75508 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN11O75508 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN11O75508 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CLDN11O75508 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN11O75508 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN11O75508 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN11O75508 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLDN11O75508 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN11O75508 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 REXO1L8P-201ENST00000604378 1897 ntBASIC16.71■□□□□ 0.27
CLDN11O75508 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN11O75508 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLDN11O75508 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLDN11O75508 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN11O75508 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLDN11O75508 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLDN11O75508 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN11O75508 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CLDN11O75508 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLDN11O75508 AC107890.1-201ENST00000422478 521 ntBASIC16.71■□□□□ 0.27
CLDN11O75508 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN11O75508 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN11O75508 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN11O75508 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN11O75508 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.71■□□□□ 0.27
CLDN11O75508 AC140878.1-201ENST00000565277 250 ntBASIC16.71■□□□□ 0.27
CLDN11O75508 MIR4321-201ENST00000592276 80 ntBASIC16.71■□□□□ 0.27
CLDN11O75508 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 AL035456.1-201ENST00000456064 1369 ntBASIC16.71■□□□□ 0.27
CLDN11O75508 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN11O75508 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLDN11O75508 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN11O75508 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN11O75508 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN11O75508 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLDN11O75508 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN11O75508 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.71■□□□□ 0.26
CLDN11O75508 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CLDN11O75508 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLDN11O75508 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN11O75508 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN11O75508 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN11O75508 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN11O75508 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN11O75508 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN11O75508 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CLDN11O75508 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN11O75508 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN11O75508 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.7■□□□□ 0.26
CLDN11O75508 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN11O75508 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.7■□□□□ 0.26
CLDN11O75508 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN11O75508 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms