Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LINC02084-201ENST00000606069 1096 ntBASIC17.81■□□□□ 0.44
RNF40O75150 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.81■□□□□ 0.44
RNF40O75150 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF40O75150 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF40O75150 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF40O75150 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF40O75150 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF40O75150 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RNF40O75150 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF40O75150 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF40O75150 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF40O75150 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF40O75150 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF40O75150 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF40O75150 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
RNF40O75150 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF40O75150 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF40O75150 HTR5BP-201ENST00000430851 1154 ntBASIC17.8■□□□□ 0.44
RNF40O75150 PRSS29P-201ENST00000440800 595 ntBASIC17.8■□□□□ 0.44
RNF40O75150 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF40O75150 AC019129.2-201ENST00000609837 1235 ntBASIC17.8■□□□□ 0.44
RNF40O75150 AL078644.1-201ENST00000609881 752 ntBASIC17.8■□□□□ 0.44
RNF40O75150 C20orf181-201ENST00000623918 480 ntBASIC17.8■□□□□ 0.44
RNF40O75150 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
RNF40O75150 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF40O75150 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF40O75150 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF40O75150 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF40O75150 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF40O75150 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RNF40O75150 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF40O75150 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF40O75150 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF40O75150 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
RNF40O75150 AC254562.1-201ENST00000417586 456 ntBASIC17.79■□□□□ 0.44
RNF40O75150 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
RNF40O75150 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF40O75150 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 AC109462.3-201ENST00000573934 613 ntBASIC17.79■□□□□ 0.44
RNF40O75150 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RNF40O75150 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF40O75150 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF40O75150 GPR89P-201ENST00000407924 1495 ntBASIC17.79■□□□□ 0.44
RNF40O75150 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF40O75150 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF40O75150 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF40O75150 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF40O75150 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF40O75150 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF40O75150 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNF40O75150 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF40O75150 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF40O75150 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF40O75150 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF40O75150 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF40O75150 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF40O75150 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF40O75150 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF40O75150 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF40O75150 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms