Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.21■□□□□ 0.35
OPHN1O60890 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
OPHN1O60890 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
OPHN1O60890 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
OPHN1O60890 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
OPHN1O60890 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
OPHN1O60890 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.2■□□□□ 0.34
OPHN1O60890 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.2■□□□□ 0.34
OPHN1O60890 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.2■□□□□ 0.34
OPHN1O60890 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
OPHN1O60890 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
OPHN1O60890 MRPL20P1-201ENST00000400819 433 ntBASIC17.2■□□□□ 0.34
OPHN1O60890 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.2■□□□□ 0.34
OPHN1O60890 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.2■□□□□ 0.34
OPHN1O60890 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.2■□□□□ 0.34
OPHN1O60890 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.2■□□□□ 0.34
OPHN1O60890 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 MIR4492-201ENST00000581627 80 ntBASIC17.2■□□□□ 0.34
OPHN1O60890 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.2■□□□□ 0.34
OPHN1O60890 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.2■□□□□ 0.34
OPHN1O60890 GGTLC5P-201ENST00000617623 998 ntBASIC17.2■□□□□ 0.34
OPHN1O60890 AC004877.2-201ENST00000623941 599 ntBASIC17.2■□□□□ 0.34
OPHN1O60890 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.2■□□□□ 0.34
OPHN1O60890 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.2■□□□□ 0.34
OPHN1O60890 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.2■□□□□ 0.34
OPHN1O60890 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
OPHN1O60890 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.2■□□□□ 0.34
OPHN1O60890 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
OPHN1O60890 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
OPHN1O60890 AC068587.6-202ENST00000641839 5619 ntBASIC17.2■□□□□ 0.34
OPHN1O60890 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
OPHN1O60890 BCAR1-209ENST00000546196 1340 ntBASIC17.2■□□□□ 0.34
OPHN1O60890 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.19■□□□□ 0.34
OPHN1O60890 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.19■□□□□ 0.34
OPHN1O60890 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 LINC00554-201ENST00000564841 3011 ntBASIC17.19■□□□□ 0.34
OPHN1O60890 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.19■□□□□ 0.34
OPHN1O60890 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
OPHN1O60890 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
OPHN1O60890 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
OPHN1O60890 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.19■□□□□ 0.34
OPHN1O60890 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.19■□□□□ 0.34
OPHN1O60890 COX20P2-201ENST00000452636 358 ntBASIC17.19■□□□□ 0.34
OPHN1O60890 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.19■□□□□ 0.34
OPHN1O60890 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.19■□□□□ 0.34
OPHN1O60890 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
OPHN1O60890 SLC25A6P2-201ENST00000497974 877 ntBASIC17.19■□□□□ 0.34
OPHN1O60890 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
OPHN1O60890 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.19■□□□□ 0.34
OPHN1O60890 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.19■□□□□ 0.34
OPHN1O60890 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
OPHN1O60890 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.19■□□□□ 0.34
OPHN1O60890 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
OPHN1O60890 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.19■□□□□ 0.34
OPHN1O60890 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.19■□□□□ 0.34
OPHN1O60890 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.19■□□□□ 0.34
OPHN1O60890 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
OPHN1O60890 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
OPHN1O60890 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.18■□□□□ 0.34
OPHN1O60890 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
OPHN1O60890 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
OPHN1O60890 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms