Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 OR8S1-201ENST00000310194 1080 ntBASIC16.28■□□□□ 0.2
PCDHGA12O60330 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.28■□□□□ 0.2
PCDHGA12O60330 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 AC004233.3-201ENST00000607794 1269 ntBASIC16.28■□□□□ 0.2
PCDHGA12O60330 AC003101.2-201ENST00000612557 442 ntBASIC16.28■□□□□ 0.2
PCDHGA12O60330 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.28■□□□□ 0.2
PCDHGA12O60330 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA12O60330 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA12O60330 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA12O60330 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 AL021920.2-201ENST00000624828 1351 ntBASIC16.27■□□□□ 0.2
PCDHGA12O60330 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA12O60330 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA12O60330 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA12O60330 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA12O60330 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA12O60330 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.27■□□□□ 0.2
PCDHGA12O60330 COX5BP8-201ENST00000416911 349 ntBASIC16.27■□□□□ 0.2
PCDHGA12O60330 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA12O60330 SPTLC1P1-201ENST00000447199 261 ntBASIC16.27■□□□□ 0.2
PCDHGA12O60330 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.27■□□□□ 0.2
PCDHGA12O60330 RN7SL692P-201ENST00000464677 288 ntBASIC16.27■□□□□ 0.2
PCDHGA12O60330 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 AL138828.2-201ENST00000615812 383 ntBASIC16.27■□□□□ 0.2
PCDHGA12O60330 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA12O60330 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA12O60330 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA12O60330 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PCDHGA12O60330 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA12O60330 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA12O60330 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA12O60330 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA12O60330 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDHGA12O60330 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA12O60330 KRT8P49-201ENST00000604166 1432 ntBASIC16.27■□□□□ 0.19
PCDHGA12O60330 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
PCDHGA12O60330 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGA12O60330 LINC00895-201ENST00000629028 1637 ntBASIC16.27■□□□□ 0.19
PCDHGA12O60330 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 AL035456.1-201ENST00000456064 1369 ntBASIC16.26■□□□□ 0.19
PCDHGA12O60330 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms