Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.18■□□□□ 0.02
IDH3BO43837 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.18■□□□□ 0.02
IDH3BO43837 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
IDH3BO43837 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.18■□□□□ 0.02
IDH3BO43837 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.18■□□□□ 0.02
IDH3BO43837 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.18■□□□□ 0.02
IDH3BO43837 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.18■□□□□ 0.02
IDH3BO43837 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IDH3BO43837 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
IDH3BO43837 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.18■□□□□ 0.02
IDH3BO43837 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.18■□□□□ 0.02
IDH3BO43837 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.18■□□□□ 0.02
IDH3BO43837 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
IDH3BO43837 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IDH3BO43837 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.17■□□□□ 0.02
IDH3BO43837 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.17■□□□□ 0.02
IDH3BO43837 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.17■□□□□ 0.02
IDH3BO43837 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.17■□□□□ 0.02
IDH3BO43837 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.17■□□□□ 0.02
IDH3BO43837 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 TOP3BP1-201ENST00000420768 1380 ntBASIC15.17■□□□□ 0.02
IDH3BO43837 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.17■□□□□ 0.02
IDH3BO43837 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 AC132008.2-207ENST00000454517 770 ntBASIC15.17■□□□□ 0.02
IDH3BO43837 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.17■□□□□ 0.02
IDH3BO43837 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
IDH3BO43837 AL589182.2-201ENST00000619332 1049 ntBASIC15.17■□□□□ 0.02
IDH3BO43837 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.17■□□□□ 0.02
IDH3BO43837 AL139288.1-201ENST00000623748 933 ntBASIC15.17■□□□□ 0.02
IDH3BO43837 AL358472.4-201ENST00000633140 710 ntBASIC15.17■□□□□ 0.02
IDH3BO43837 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.17■□□□□ 0.02
IDH3BO43837 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
IDH3BO43837 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IDH3BO43837 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
IDH3BO43837 ME2P1-201ENST00000426028 1970 ntBASIC15.16■□□□□ 0.02
IDH3BO43837 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
IDH3BO43837 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
IDH3BO43837 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.16■□□□□ 0.02
IDH3BO43837 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
IDH3BO43837 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.16■□□□□ 0.02
IDH3BO43837 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.16■□□□□ 0.02
IDH3BO43837 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.16■□□□□ 0.02
IDH3BO43837 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.16■□□□□ 0.02
IDH3BO43837 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.16■□□□□ 0.02
IDH3BO43837 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.16■□□□□ 0.02
IDH3BO43837 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.16■□□□□ 0.02
IDH3BO43837 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.16■□□□□ 0.02
IDH3BO43837 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.16■□□□□ 0.02
IDH3BO43837 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.16■□□□□ 0.02
IDH3BO43837 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IDH3BO43837 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms