Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.42■□□□□ 0.54
ACTN4O43707 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ACTN4O43707 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.42■□□□□ 0.54
ACTN4O43707 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ACTN4O43707 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ACTN4O43707 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ACTN4O43707 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.42■□□□□ 0.54
ACTN4O43707 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ACTN4O43707 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ACTN4O43707 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ACTN4O43707 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ACTN4O43707 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.41■□□□□ 0.54
ACTN4O43707 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ACTN4O43707 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.41■□□□□ 0.54
ACTN4O43707 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.41■□□□□ 0.54
ACTN4O43707 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.41■□□□□ 0.54
ACTN4O43707 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
ACTN4O43707 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ACTN4O43707 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 AC092474.2-201ENST00000424288 719 ntBASIC18.41■□□□□ 0.54
ACTN4O43707 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.41■□□□□ 0.54
ACTN4O43707 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.41■□□□□ 0.54
ACTN4O43707 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
ACTN4O43707 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.41■□□□□ 0.54
ACTN4O43707 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.41■□□□□ 0.54
ACTN4O43707 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.41■□□□□ 0.54
ACTN4O43707 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.41■□□□□ 0.54
ACTN4O43707 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
ACTN4O43707 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ACTN4O43707 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.41■□□□□ 0.54
ACTN4O43707 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ACTN4O43707 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.41■□□□□ 0.54
ACTN4O43707 AP005117.1-202ENST00000581724 1908 ntBASIC18.41■□□□□ 0.54
ACTN4O43707 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ACTN4O43707 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ACTN4O43707 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.4■□□□□ 0.54
ACTN4O43707 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.4■□□□□ 0.54
ACTN4O43707 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.4■□□□□ 0.54
ACTN4O43707 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.4■□□□□ 0.54
ACTN4O43707 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
ACTN4O43707 U82695.1-201ENST00000635752 1889 ntBASIC18.4■□□□□ 0.54
ACTN4O43707 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.4■□□□□ 0.54
ACTN4O43707 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ACTN4O43707 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ACTN4O43707 KRT18P2-201ENST00000447938 1258 ntBASIC18.4■□□□□ 0.54
ACTN4O43707 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.4■□□□□ 0.54
ACTN4O43707 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 AC018845.2-201ENST00000568326 409 ntBASIC18.4■□□□□ 0.54
ACTN4O43707 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.4■□□□□ 0.54
ACTN4O43707 AC023141.13-201ENST00000604991 943 ntBASIC18.4■□□□□ 0.54
ACTN4O43707 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ACTN4O43707 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ACTN4O43707 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ACTN4O43707 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ACTN4O43707 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.4■□□□□ 0.54
ACTN4O43707 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ACTN4O43707 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.4■□□□□ 0.54
ACTN4O43707 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 AC104109.2-201ENST00000602919 1418 ntBASIC18.4■□□□□ 0.54
ACTN4O43707 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.4■□□□□ 0.54
ACTN4O43707 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ACTN4O43707 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.39■□□□□ 0.54
ACTN4O43707 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ACTN4O43707 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms