Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
KCNQ3O43525 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNQ3O43525 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
KCNQ3O43525 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KCNQ3O43525 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KCNQ3O43525 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNQ3O43525 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.87■□□□□ 0.93
KCNQ3O43525 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNQ3O43525 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.87■□□□□ 0.93
KCNQ3O43525 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KCNQ3O43525 GK-202ENST00000378941 458 ntTSL 3 BASIC20.87■□□□□ 0.93
KCNQ3O43525 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.87■□□□□ 0.93
KCNQ3O43525 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KCNQ3O43525 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.87■□□□□ 0.93
KCNQ3O43525 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
KCNQ3O43525 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.87■□□□□ 0.93
KCNQ3O43525 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.87■□□□□ 0.93
KCNQ3O43525 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.87■□□□□ 0.93
KCNQ3O43525 AC027307.3-201ENST00000594262 1100 ntBASIC20.87■□□□□ 0.93
KCNQ3O43525 AC008494.3-201ENST00000606615 944 ntBASIC20.87■□□□□ 0.93
KCNQ3O43525 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNQ3O43525 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNQ3O43525 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KCNQ3O43525 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNQ3O43525 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KCNQ3O43525 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ3O43525 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 AC026471.1-201ENST00000564629 3026 ntBASIC20.86■□□□□ 0.93
KCNQ3O43525 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
KCNQ3O43525 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.86■□□□□ 0.93
KCNQ3O43525 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.86■□□□□ 0.93
KCNQ3O43525 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
KCNQ3O43525 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
KCNQ3O43525 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
KCNQ3O43525 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNQ3O43525 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 AC098850.1-201ENST00000419919 790 ntBASIC20.86■□□□□ 0.93
KCNQ3O43525 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNQ3O43525 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNQ3O43525 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.86■□□□□ 0.93
KCNQ3O43525 SERBP1P3-201ENST00000459980 809 ntBASIC20.86■□□□□ 0.93
KCNQ3O43525 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.86■□□□□ 0.93
KCNQ3O43525 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KCNQ3O43525 AC140912.1-201ENST00000577171 1054 ntBASIC20.86■□□□□ 0.93
KCNQ3O43525 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.86■□□□□ 0.93
KCNQ3O43525 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNQ3O43525 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNQ3O43525 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ3O43525 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ3O43525 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ3O43525 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.85■□□□□ 0.93
KCNQ3O43525 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ3O43525 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ3O43525 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ3O43525 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
KCNQ3O43525 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ3O43525 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KCNQ3O43525 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ3O43525 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ3O43525 AL592424.1-201ENST00000563624 1536 ntBASIC20.85■□□□□ 0.93
KCNQ3O43525 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KCNQ3O43525 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ3O43525 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ3O43525 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
KCNQ3O43525 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ3O43525 DFFBP1-201ENST00000433250 979 ntBASIC20.85■□□□□ 0.93
KCNQ3O43525 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.85■□□□□ 0.93
KCNQ3O43525 AC244107.1-201ENST00000442033 332 ntBASIC20.85■□□□□ 0.93
KCNQ3O43525 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.85■□□□□ 0.93
KCNQ3O43525 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.85■□□□□ 0.93
KCNQ3O43525 SDHAP3-202ENST00000515467 728 ntBASIC20.85■□□□□ 0.93
KCNQ3O43525 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.85■□□□□ 0.93
KCNQ3O43525 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms