Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.71■□□□□ 0.27
RIPK2O43353 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.71■□□□□ 0.27
RIPK2O43353 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.71■□□□□ 0.27
RIPK2O43353 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.71■□□□□ 0.27
RIPK2O43353 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.71■□□□□ 0.27
RIPK2O43353 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.71■□□□□ 0.27
RIPK2O43353 AP000867.3-201ENST00000524675 377 ntBASIC16.71■□□□□ 0.27
RIPK2O43353 AL109954.1-202ENST00000564051 2148 ntBASIC16.71■□□□□ 0.27
RIPK2O43353 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.71■□□□□ 0.27
RIPK2O43353 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.71■□□□□ 0.27
RIPK2O43353 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.71■□□□□ 0.27
RIPK2O43353 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RIPK2O43353 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RIPK2O43353 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.71■□□□□ 0.27
RIPK2O43353 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.71■□□□□ 0.27
RIPK2O43353 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RIPK2O43353 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.71■□□□□ 0.27
RIPK2O43353 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RIPK2O43353 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
RIPK2O43353 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
RIPK2O43353 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RIPK2O43353 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.7■□□□□ 0.26
RIPK2O43353 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.7■□□□□ 0.26
RIPK2O43353 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RIPK2O43353 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.7■□□□□ 0.26
RIPK2O43353 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.7■□□□□ 0.26
RIPK2O43353 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.7■□□□□ 0.26
RIPK2O43353 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RIPK2O43353 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.7■□□□□ 0.26
RIPK2O43353 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RIPK2O43353 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.7■□□□□ 0.26
RIPK2O43353 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.7■□□□□ 0.26
RIPK2O43353 AC132008.2-207ENST00000454517 770 ntBASIC16.7■□□□□ 0.26
RIPK2O43353 AC106795.1-205ENST00000512851 1056 ntBASIC16.7■□□□□ 0.26
RIPK2O43353 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.7■□□□□ 0.26
RIPK2O43353 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.7■□□□□ 0.26
RIPK2O43353 AC012615.1-201ENST00000565797 1299 ntBASIC16.7■□□□□ 0.26
RIPK2O43353 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 AP001350.2-201ENST00000625104 1094 ntBASIC16.7■□□□□ 0.26
RIPK2O43353 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.7■□□□□ 0.26
RIPK2O43353 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RIPK2O43353 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RIPK2O43353 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RIPK2O43353 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.7■□□□□ 0.26
RIPK2O43353 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RIPK2O43353 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RIPK2O43353 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.69■□□□□ 0.26
RIPK2O43353 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RIPK2O43353 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RIPK2O43353 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RIPK2O43353 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RIPK2O43353 RCN1P1-201ENST00000400413 996 ntBASIC16.69■□□□□ 0.26
RIPK2O43353 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.69■□□□□ 0.26
RIPK2O43353 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.69■□□□□ 0.26
RIPK2O43353 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.69■□□□□ 0.26
RIPK2O43353 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.69■□□□□ 0.26
RIPK2O43353 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.69■□□□□ 0.26
RIPK2O43353 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.69■□□□□ 0.26
RIPK2O43353 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.69■□□□□ 0.26
RIPK2O43353 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 AC004706.3-202ENST00000621574 984 ntBASIC16.69■□□□□ 0.26
RIPK2O43353 AL139288.1-201ENST00000623748 933 ntBASIC16.69■□□□□ 0.26
RIPK2O43353 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.69■□□□□ 0.26
RIPK2O43353 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.69■□□□□ 0.26
RIPK2O43353 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.69■□□□□ 0.26
RIPK2O43353 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 FAM45BP-202ENST00000592932 1624 ntBASIC16.69■□□□□ 0.26
RIPK2O43353 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.69■□□□□ 0.26
RIPK2O43353 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RIPK2O43353 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms