Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FAM215A-202ENST00000632077 792 ntBASIC16.39■□□□□ 0.21
PHGDHO43175 PGM5P2-202ENST00000637225 1043 ntBASIC16.39■□□□□ 0.21
PHGDHO43175 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.39■□□□□ 0.21
PHGDHO43175 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHGDHO43175 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.39■□□□□ 0.21
PHGDHO43175 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PHGDHO43175 AC103702.1-201ENST00000548801 2630 ntBASIC16.39■□□□□ 0.21
PHGDHO43175 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHGDHO43175 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PHGDHO43175 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHGDHO43175 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHGDHO43175 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHGDHO43175 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PHGDHO43175 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.38■□□□□ 0.21
PHGDHO43175 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PHGDHO43175 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PHGDHO43175 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.38■□□□□ 0.21
PHGDHO43175 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.38■□□□□ 0.21
PHGDHO43175 AC092910.1-201ENST00000482027 1129 ntBASIC16.38■□□□□ 0.21
PHGDHO43175 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PHGDHO43175 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.38■□□□□ 0.21
PHGDHO43175 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
PHGDHO43175 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.38■□□□□ 0.21
PHGDHO43175 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.38■□□□□ 0.21
PHGDHO43175 AL049840.3-201ENST00000602669 611 ntBASIC16.38■□□□□ 0.21
PHGDHO43175 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PHGDHO43175 AL691432.3-201ENST00000621860 400 ntBASIC16.38■□□□□ 0.21
PHGDHO43175 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.38■□□□□ 0.21
PHGDHO43175 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PHGDHO43175 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PHGDHO43175 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.38■□□□□ 0.21
PHGDHO43175 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.38■□□□□ 0.21
PHGDHO43175 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHGDHO43175 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.37■□□□□ 0.21
PHGDHO43175 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.37■□□□□ 0.21
PHGDHO43175 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PHGDHO43175 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.37■□□□□ 0.21
PHGDHO43175 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
PHGDHO43175 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.37■□□□□ 0.21
PHGDHO43175 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PHGDHO43175 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.37■□□□□ 0.21
PHGDHO43175 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 PRAL-201ENST00000624952 3286 ntBASIC16.37■□□□□ 0.21
PHGDHO43175 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.37■□□□□ 0.21
PHGDHO43175 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.37■□□□□ 0.21
PHGDHO43175 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
PHGDHO43175 FAM185BP-201ENST00000443595 716 ntBASIC16.37■□□□□ 0.21
PHGDHO43175 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.37■□□□□ 0.21
PHGDHO43175 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.37■□□□□ 0.21
PHGDHO43175 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.37■□□□□ 0.21
PHGDHO43175 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PHGDHO43175 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PHGDHO43175 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PHGDHO43175 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PHGDHO43175 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
PHGDHO43175 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
PHGDHO43175 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHGDHO43175 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.36■□□□□ 0.21
PHGDHO43175 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.36■□□□□ 0.21
PHGDHO43175 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms