Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
NDUFA1O15239 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.3□□□□□ -0.6
NDUFA1O15239 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 AL020989.1-201ENST00000422979 469 ntBASIC11.3□□□□□ -0.6
NDUFA1O15239 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.3□□□□□ -0.6
NDUFA1O15239 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 TSSC2-201ENST00000450217 709 ntBASIC11.3□□□□□ -0.6
NDUFA1O15239 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.3□□□□□ -0.6
NDUFA1O15239 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.3□□□□□ -0.6
NDUFA1O15239 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.3□□□□□ -0.6
NDUFA1O15239 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.3□□□□□ -0.6
NDUFA1O15239 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.3□□□□□ -0.6
NDUFA1O15239 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 AC005332.1-201ENST00000577698 1310 ntBASIC11.3□□□□□ -0.6
NDUFA1O15239 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.3□□□□□ -0.6
NDUFA1O15239 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.29□□□□□ -0.6
NDUFA1O15239 AC233702.3-201ENST00000578656 1387 ntBASIC11.29□□□□□ -0.6
NDUFA1O15239 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.29□□□□□ -0.6
NDUFA1O15239 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 LINC02447-202ENST00000501888 2146 ntBASIC11.29□□□□□ -0.6
NDUFA1O15239 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 AC006277.1-201ENST00000624348 1610 ntBASIC11.29□□□□□ -0.6
NDUFA1O15239 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
NDUFA1O15239 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 AL031133.1-201ENST00000406807 723 ntBASIC11.29□□□□□ -0.6
NDUFA1O15239 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.29□□□□□ -0.6
NDUFA1O15239 ACTG1P4-201ENST00000425123 1122 ntBASIC11.29□□□□□ -0.6
NDUFA1O15239 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.29□□□□□ -0.6
NDUFA1O15239 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.29□□□□□ -0.6
NDUFA1O15239 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
NDUFA1O15239 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 AL049597.2-201ENST00000565575 961 ntBASIC11.29□□□□□ -0.6
NDUFA1O15239 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.29□□□□□ -0.6
NDUFA1O15239 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
NDUFA1O15239 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.29□□□□□ -0.6
NDUFA1O15239 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
NDUFA1O15239 PPT1-215ENST00000641471 2368 ntBASIC11.29□□□□□ -0.6
NDUFA1O15239 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
NDUFA1O15239 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.29□□□□□ -0.6
NDUFA1O15239 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
NDUFA1O15239 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
NDUFA1O15239 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.29□□□□□ -0.6
NDUFA1O15239 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC11.29□□□□□ -0.6
NDUFA1O15239 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.29□□□□□ -0.6
NDUFA1O15239 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.29□□□□□ -0.6
NDUFA1O15239 CDC14C-201ENST00000428251 1719 ntBASIC11.29□□□□□ -0.6
NDUFA1O15239 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NDUFA1O15239 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.29□□□□□ -0.6
NDUFA1O15239 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NDUFA1O15239 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
NDUFA1O15239 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.28□□□□□ -0.6
NDUFA1O15239 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms