Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SPTBN2O15020 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.47■□□□□ 0.07
SPTBN2O15020 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.47■□□□□ 0.07
SPTBN2O15020 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.47■□□□□ 0.07
SPTBN2O15020 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.47■□□□□ 0.07
SPTBN2O15020 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.47■□□□□ 0.07
SPTBN2O15020 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.47■□□□□ 0.07
SPTBN2O15020 RN7SL555P-201ENST00000584742 339 ntBASIC15.47■□□□□ 0.07
SPTBN2O15020 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.47■□□□□ 0.07
SPTBN2O15020 AC005702.4-201ENST00000618393 416 ntBASIC15.47■□□□□ 0.07
SPTBN2O15020 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SPTBN2O15020 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SPTBN2O15020 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.46■□□□□ 0.07
SPTBN2O15020 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.46■□□□□ 0.07
SPTBN2O15020 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.46■□□□□ 0.07
SPTBN2O15020 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.46■□□□□ 0.07
SPTBN2O15020 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.46■□□□□ 0.07
SPTBN2O15020 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.46■□□□□ 0.07
SPTBN2O15020 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.46■□□□□ 0.07
SPTBN2O15020 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.46■□□□□ 0.07
SPTBN2O15020 MIR4750-201ENST00000584564 56 ntBASIC15.46■□□□□ 0.07
SPTBN2O15020 AC074044.1-201ENST00000609673 707 ntBASIC15.46■□□□□ 0.07
SPTBN2O15020 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.46■□□□□ 0.07
SPTBN2O15020 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.46■□□□□ 0.07
SPTBN2O15020 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SPTBN2O15020 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.46■□□□□ 0.07
SPTBN2O15020 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SPTBN2O15020 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.46■□□□□ 0.06
SPTBN2O15020 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SPTBN2O15020 AC134312.5-201ENST00000568031 1313 ntBASIC15.46■□□□□ 0.06
SPTBN2O15020 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SPTBN2O15020 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SPTBN2O15020 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SPTBN2O15020 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SPTBN2O15020 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.46■□□□□ 0.06
SPTBN2O15020 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.46■□□□□ 0.06
SPTBN2O15020 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.46■□□□□ 0.06
SPTBN2O15020 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.46■□□□□ 0.06
SPTBN2O15020 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.46■□□□□ 0.06
SPTBN2O15020 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.46■□□□□ 0.06
SPTBN2O15020 FGFR3P5-201ENST00000564496 886 ntBASIC15.46■□□□□ 0.06
SPTBN2O15020 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.46■□□□□ 0.06
SPTBN2O15020 AC091812.3-201ENST00000621362 345 ntBASIC15.46■□□□□ 0.06
SPTBN2O15020 AC138951.2-201ENST00000623455 1161 ntBASIC15.46■□□□□ 0.06
SPTBN2O15020 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SPTBN2O15020 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.46■□□□□ 0.06
SPTBN2O15020 AC012317.2-201ENST00000623305 2251 ntBASIC15.46■□□□□ 0.06
SPTBN2O15020 AL355312.1-201ENST00000407115 2176 ntBASIC15.45■□□□□ 0.06
SPTBN2O15020 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.45■□□□□ 0.06
SPTBN2O15020 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.45■□□□□ 0.06
SPTBN2O15020 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.45■□□□□ 0.06
SPTBN2O15020 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SPTBN2O15020 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.45■□□□□ 0.06
SPTBN2O15020 AL136301.1-201ENST00000615830 422 ntBASIC15.45■□□□□ 0.06
SPTBN2O15020 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.45■□□□□ 0.06
SPTBN2O15020 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.45■□□□□ 0.06
SPTBN2O15020 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SPTBN2O15020 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPTBN2O15020 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms