Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AL390955.2-201ENST00000603032 514 ntBASIC17.28■□□□□ 0.36
CLDN5O00501 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN5O00501 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN5O00501 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN5O00501 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN5O00501 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
CLDN5O00501 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN5O00501 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLDN5O00501 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN5O00501 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN5O00501 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN5O00501 REXO1L8P-201ENST00000604378 1897 ntBASIC17.27■□□□□ 0.36
CLDN5O00501 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN5O00501 AC099398.1-201ENST00000567919 2776 ntBASIC17.27■□□□□ 0.36
CLDN5O00501 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN5O00501 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN5O00501 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN5O00501 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN5O00501 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN5O00501 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CLDN5O00501 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN5O00501 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN5O00501 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN5O00501 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN5O00501 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN5O00501 AC067863.1-201ENST00000494933 530 ntBASIC17.27■□□□□ 0.36
CLDN5O00501 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.27■□□□□ 0.36
CLDN5O00501 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN5O00501 AC005498.2-205ENST00000593218 784 ntBASIC17.27■□□□□ 0.36
CLDN5O00501 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN5O00501 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CLDN5O00501 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CLDN5O00501 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN5O00501 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN5O00501 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN5O00501 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CLDN5O00501 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.27■□□□□ 0.35
CLDN5O00501 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN5O00501 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN5O00501 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.27■□□□□ 0.35
CLDN5O00501 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.27■□□□□ 0.35
CLDN5O00501 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CLDN5O00501 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN5O00501 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN5O00501 U82695.1-201ENST00000635752 1889 ntBASIC17.27■□□□□ 0.35
CLDN5O00501 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLDN5O00501 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CLDN5O00501 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN5O00501 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLDN5O00501 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN5O00501 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN5O00501 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLDN5O00501 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CLDN5O00501 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN5O00501 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN5O00501 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN5O00501 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CLDN5O00501 TREML5P-201ENST00000421694 576 ntBASIC17.26■□□□□ 0.35
CLDN5O00501 AC107890.1-201ENST00000422478 521 ntBASIC17.26■□□□□ 0.35
CLDN5O00501 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN5O00501 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLDN5O00501 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CLDN5O00501 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN5O00501 POU5F1P6-201ENST00000466990 990 ntBASIC17.26■□□□□ 0.35
CLDN5O00501 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.26■□□□□ 0.35
CLDN5O00501 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN5O00501 AC061975.2-201ENST00000581722 295 ntBASIC17.26■□□□□ 0.35
CLDN5O00501 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN5O00501 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN5O00501 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN5O00501 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CLDN5O00501 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN5O00501 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN5O00501 FO538757.1-201ENST00000623083 1397 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms