Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A1O00337 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 U82695.1-201ENST00000635752 1889 ntBASIC15.84■□□□□ 0.13
SLC28A1O00337 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.84■□□□□ 0.13
SLC28A1O00337 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC28A1O00337 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SLC28A1O00337 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SLC28A1O00337 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC28A1O00337 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.84■□□□□ 0.13
SLC28A1O00337 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SLC28A1O00337 AL031432.2-201ENST00000566714 459 ntBASIC15.84■□□□□ 0.13
SLC28A1O00337 AL928711.1-201ENST00000570165 459 ntBASIC15.84■□□□□ 0.13
SLC28A1O00337 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 FAM215A-202ENST00000632077 792 ntBASIC15.84■□□□□ 0.13
SLC28A1O00337 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SLC28A1O00337 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SLC28A1O00337 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC28A1O00337 AC132872.4-202ENST00000622924 2756 ntBASIC15.84■□□□□ 0.13
SLC28A1O00337 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC28A1O00337 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SLC28A1O00337 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC28A1O00337 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC28A1O00337 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC28A1O00337 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC28A1O00337 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A1O00337 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC28A1O00337 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC28A1O00337 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC28A1O00337 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
SLC28A1O00337 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC28A1O00337 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC28A1O00337 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.83■□□□□ 0.13
SLC28A1O00337 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC28A1O00337 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.83■□□□□ 0.13
SLC28A1O00337 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.83■□□□□ 0.13
SLC28A1O00337 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC28A1O00337 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC28A1O00337 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC28A1O00337 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.83■□□□□ 0.13
SLC28A1O00337 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC28A1O00337 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SLC28A1O00337 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC28A1O00337 AC112504.1-201ENST00000623415 1841 ntBASIC15.83■□□□□ 0.12
SLC28A1O00337 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
SLC28A1O00337 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC28A1O00337 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC28A1O00337 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SLC28A1O00337 AL513480.1-201ENST00000451731 511 ntBASIC15.83■□□□□ 0.12
SLC28A1O00337 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC28A1O00337 MIR4751-201ENST00000578027 74 ntBASIC15.83■□□□□ 0.12
SLC28A1O00337 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.83■□□□□ 0.12
SLC28A1O00337 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC28A1O00337 AC117500.6-201ENST00000624871 588 ntBASIC15.83■□□□□ 0.12
SLC28A1O00337 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC28A1O00337 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC28A1O00337 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC28A1O00337 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SLC28A1O00337 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC28A1O00337 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A1O00337 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC28A1O00337 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC28A1O00337 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A1O00337 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC28A1O00337 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A1O00337 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC28A1O00337 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A1O00337 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms