Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4M1O00189 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4M1O00189 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP4M1O00189 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP4M1O00189 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4M1O00189 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.67□□□□□ -0.22
AP4M1O00189 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP4M1O00189 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.67□□□□□ -0.22
AP4M1O00189 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AP4M1O00189 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 AC005915.1-201ENST00000624912 2018 ntBASIC13.66□□□□□ -0.22
AP4M1O00189 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4M1O00189 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP4M1O00189 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 HNRNPDP1-201ENST00000439535 754 ntBASIC13.66□□□□□ -0.22
AP4M1O00189 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.66□□□□□ -0.22
AP4M1O00189 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.66□□□□□ -0.22
AP4M1O00189 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4M1O00189 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AP4M1O00189 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4M1O00189 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4M1O00189 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.66□□□□□ -0.22
AP4M1O00189 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
AP4M1O00189 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.66□□□□□ -0.22
AP4M1O00189 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AP4M1O00189 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
AP4M1O00189 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.66□□□□□ -0.22
AP4M1O00189 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 SNX18-202ENST00000343017 3140 ntBASIC13.66□□□□□ -0.22
AP4M1O00189 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4M1O00189 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AP4M1O00189 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4M1O00189 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.65□□□□□ -0.22
AP4M1O00189 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AP4M1O00189 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AP4M1O00189 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
AP4M1O00189 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.65□□□□□ -0.22
AP4M1O00189 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AP4M1O00189 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AP4M1O00189 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.65□□□□□ -0.22
AP4M1O00189 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.65□□□□□ -0.22
AP4M1O00189 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.65□□□□□ -0.22
AP4M1O00189 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.65□□□□□ -0.22
AP4M1O00189 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.65□□□□□ -0.22
AP4M1O00189 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
AP4M1O00189 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.65□□□□□ -0.22
AP4M1O00189 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 AL139424.1-201ENST00000607572 797 ntBASIC13.65□□□□□ -0.22
AP4M1O00189 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.65□□□□□ -0.22
AP4M1O00189 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.65□□□□□ -0.22
AP4M1O00189 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.65□□□□□ -0.22
AP4M1O00189 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.65□□□□□ -0.22
AP4M1O00189 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP4M1O00189 AL135999.2-201ENST00000622438 1686 ntBASIC13.65□□□□□ -0.22
AP4M1O00189 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms