Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 BANF1P1-201ENST00000553684 263 ntBASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AC138761.1-201ENST00000584393 385 ntBASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 TEX28P1-201ENST00000613479 1221 ntBASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 TEX28P2-201ENST00000617764 1221 ntBASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AC236430.1-201ENST00000402231 743 ntBASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AC002472.2-201ENST00000442739 958 ntBASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 UGT1A2P-201ENST00000454886 866 ntBASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AL079307.3-201ENST00000556114 283 ntBASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AC022144.1-201ENST00000602255 1580 ntBASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AC012313.1-201ENST00000593393 3059 ntBASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 TSSK5P-201ENST00000423978 907 ntBASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.37■□□□□ 0.21
C1QTNF3-AMACRE9PGA6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms