Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 AC017076.1-201ENST00000607613 578 ntBASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDYE2BA6NHP3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 AC018470.1-201ENST00000624790 3129 ntBASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 MIR1909-201ENST00000411312 80 ntBASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 KRT17P8-201ENST00000540749 863 ntBASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 CTBP2P3-201ENST00000585629 1255 ntBASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 AC141586.5-201ENST00000624546 2050 ntBASIC19.44■□□□□ 0.7
SPDYE2BA6NHP3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 AC098850.1-201ENST00000419919 790 ntBASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 AL357094.1-201ENST00000603845 844 ntBASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.43■□□□□ 0.7
SPDYE2BA6NHP3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPDYE2BA6NHP3 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms