Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 ITM2C-210ENST00000620962 501 ntBASIC11.59□□□□□ -0.55
LINC01546A6NGU7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.58□□□□□ -0.55
LINC01546A6NGU7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.58□□□□□ -0.56
LINC01546A6NGU7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 AL355075.4-201ENST00000554988 638 ntBASIC11.58□□□□□ -0.56
LINC01546A6NGU7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 MIR4651-201ENST00000582622 73 ntBASIC11.58□□□□□ -0.56
LINC01546A6NGU7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 AC124864.1-201ENST00000623408 392 ntBASIC11.58□□□□□ -0.56
LINC01546A6NGU7 AC073592.4-201ENST00000623827 446 ntBASIC11.58□□□□□ -0.56
LINC01546A6NGU7 AP000867.4-201ENST00000641616 219 ntBASIC11.58□□□□□ -0.56
LINC01546A6NGU7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 SLC22A20-204ENST00000530038 1673 ntBASIC11.58□□□□□ -0.56
LINC01546A6NGU7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01546A6NGU7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01546A6NGU7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms