Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 AC008667.4-201ENST00000607370 168 ntBASIC17.47■□□□□ 0.39
RCCD1A6NED2 GGTLC5P-201ENST00000617623 998 ntBASIC17.47■□□□□ 0.39
RCCD1A6NED2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 LINC02228-204ENST00000642115 2962 ntBASIC17.47■□□□□ 0.39
RCCD1A6NED2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RCCD1A6NED2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.47■□□□□ 0.39
RCCD1A6NED2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 IGHV3-65-201ENST00000523210 341 ntBASIC17.46■□□□□ 0.39
RCCD1A6NED2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 AL160237.2-201ENST00000556165 472 ntBASIC17.46■□□□□ 0.39
RCCD1A6NED2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 AL121772.3-201ENST00000610840 674 ntBASIC17.46■□□□□ 0.39
RCCD1A6NED2 ACTL9-202ENST00000612068 1252 ntBASIC17.46■□□□□ 0.39
RCCD1A6NED2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 CICP13-201ENST00000422015 2789 ntBASIC17.46■□□□□ 0.39
RCCD1A6NED2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.46■□□□□ 0.39
RCCD1A6NED2 AC012569.1-201ENST00000591191 1524 ntBASIC17.46■□□□□ 0.39
RCCD1A6NED2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCCD1A6NED2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
RCCD1A6NED2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
RCCD1A6NED2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RCCD1A6NED2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCCD1A6NED2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCCD1A6NED2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCCD1A6NED2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RCCD1A6NED2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCCD1A6NED2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 AC020658.6-201ENST00000623564 1870 ntBASIC17.45■□□□□ 0.38
RCCD1A6NED2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCCD1A6NED2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCCD1A6NED2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCCD1A6NED2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCCD1A6NED2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCCD1A6NED2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
RCCD1A6NED2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 AL136379.1-201ENST00000623471 2642 ntBASIC17.44■□□□□ 0.38
RCCD1A6NED2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.44■□□□□ 0.38
RCCD1A6NED2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCCD1A6NED2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms