Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
TRAV5A0A0B4J249 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 LINC01144-201ENST00000626198 1710 ntBASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 PRYP5-201ENST00000451909 266 ntBASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 POU5F1P6-201ENST00000466990 990 ntBASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 AC092329.2-201ENST00000598402 547 ntBASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 AL591684.3-201ENST00000605187 298 ntBASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 AP001269.4-201ENST00000609611 512 ntBASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 AC131009.4-201ENST00000624048 1740 ntBASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV5A0A0B4J249 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 PMS2P1-201ENST00000431037 1228 ntBASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 PAWRP1-201ENST00000451083 565 ntBASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 AC132008.2-207ENST00000454517 770 ntBASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 REXO1L3P-201ENST00000622202 1288 ntBASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV5A0A0B4J249 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms