Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 FSCN1P1-201ENST00000568912 1481 ntBASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 AL353708.3-201ENST00000610272 989 ntBASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 CR769767.2-201ENST00000622735 460 ntBASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 CR392000.1-201ENST00000624770 1228 ntBASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.49□□□□□ -0.41
TRAPPC1Q9Y5R8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 REXO1L8P-201ENST00000604378 1897 ntBASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 ID1-201ENST00000376105 1233 ntBASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 B3GAT3P1-201ENST00000471720 806 ntBASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAPPC1Q9Y5R8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms