Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 MTHFR-217ENST00000641820 1569 ntBASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA11Q9Y5H2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 HMGA1P7-201ENST00000406908 502 ntBASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 HCG4B-203ENST00000450128 991 ntBASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 AC096734.2-201ENST00000562054 433 ntBASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 RN7SL371P-201ENST00000578099 267 ntBASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 MIR3909-201ENST00000579518 119 ntBASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 AC021097.1-201ENST00000607902 574 ntBASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 Z83851.2-201ENST00000609564 659 ntBASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 RN7SL832P-201ENST00000607781 1756 ntBASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA11Q9Y5H2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 PMS2P4-201ENST00000412466 1052 ntBASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 IGLL3P-201ENST00000412472 434 ntBASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGA11Q9Y5H2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA11Q9Y5H2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA11Q9Y5H2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA11Q9Y5H2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGA11Q9Y5H2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGA11Q9Y5H2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA11Q9Y5H2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA11Q9Y5H2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA11Q9Y5H2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGA11Q9Y5H2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGA11Q9Y5H2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms